DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and Slc2a8

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_062361.1 Gene:Slc2a8 / 56017 MGIID:1860103 Length:477 Species:Mus musculus


Alignment Length:491 Identity:155/491 - (31%)
Similarity:249/491 - (50%) Gaps:47/491 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 MSPE------PV---------KSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTSDSPLS 81
            ||||      |:         :..|:|:|:.||.|.....|..||::||..|.|:    ..:|.:
Mouse     1 MSPEDPQETQPLLRPPEARTPRGRRVFLASFAAALGPLSFGFALGYSSPAIPSLR----RTAPPA 61

  Fly    82 RPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMS 146
            ..:..:..:|..:::.:||.....:.|.:.||.|||..||..::.||..|.:...|.:||:|...
Mouse    62 LRLGDNAASWFGAVVTLGAAAGGILGGWLLDRAGRKLSLLLCTVPFVTGFAVITAARDVWMLLGG 126

  Fly   147 RLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWCCIVV 211
            ||:.|...|....|.|:|:.||:...|||..||.:||.:|.|||..|..|..:.::.|.....|.
Mouse   127 RLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVTGILLAYVAGWVLEWRWLAVLGCVP 191

  Fly   212 PVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEAMASKGTVMD 276
            |.:..|:...|||:|.|...:.:..||:.:|:||.| |.||    ..|.....|.    :|..:.
Mouse   192 PTLMLLLMCYMPETPRFLLTQHQYQEAMAALRFLWG-SEEG----WEEPPVGAEH----QGFQLA 247

  Fly   277 LFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTP 341
            |.:..|..:.|.|...|:.||||||:|.::|.:.|||..|.. .|.::|::.:|.:||..:|:..
Mouse   248 LLRRPGIYKPLIIGISLMVFQQLSGVNAIMFYANSIFEEAKF-KDSSLASVTVGIIQVLFTAVAA 311

  Fly   342 LVADRLGRKVMLLTSSSVMSIGLAALGAFFYM-QLVKGDISSV----------------VWMPVP 389
            |:.||.||:::|..|..:|...::|.|.:|.: |.:..:.|.|                .|:.|.
Mouse   312 LIMDRAGRRLLLALSGVIMVFSMSAFGTYFKLTQSLPSNSSHVGLVPIAAEPVDVQVGLAWLAVG 376

  Fly   390 ALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPS-LDALGSYYAF 453
            ::.::...:..|:||:||.::.|:||.::|.||:.:...|.|.:.||||..:.| ::.|..|.||
Mouse   377 SMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWFMAFLVTKEFSSVMEMLRPYGAF 441

  Fly   454 WLFAVCMVVAFFFVLFVVMETKGLSLQQIQDRLNGK 489
            ||.|....::..|.|.||.||||.:|:|:.....|:
Mouse   442 WLTAAFCALSVLFTLTVVPETKGRTLEQVTAHFEGR 477

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 147/457 (32%)
MFS 47..460 CDD:119392 136/430 (32%)