DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and slc2a13b

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_005163236.1 Gene:slc2a13b / 559440 ZFINID:ZDB-GENE-090812-1 Length:641 Species:Danio rerio


Alignment Length:572 Identity:146/572 - (25%)
Similarity:224/572 - (39%) Gaps:122/572 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YSYTEVSTFQIREGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTSDS 78
            |:..|..:..|:..:.|....:|.....::..|..:.|..|:.|...|..|.....||.|....|
Zfish     7 YARVEDESTLIKTASKRDHELQPGPPCFVYTLAFFSALGGFLFGYDTGVVSGAMLLLKREKKLSS 71

  Fly    79 PLSRPITSDEDAWISSLIAV---GALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEV 140
                       .|...|:::   .|.|:....|.:..|.||:..:|.:|..|.....:..||...
Zfish    72 -----------VWQELLVSITVGAAAVSALAGGFLNGRFGRRVCILLASFIFCAGGIILSVARNK 125

  Fly   141 WILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQ 205
            ..|...||..|.|:|......|:|:.|:|..::||...::..|||.||......:....||....
Zfish   126 EALLCGRLTVGLGLGIASMTVPVYIAEVSPPDLRGQLVTVNTLFITGGQFIASVVDGAFSYLPHD 190

  Fly   206 -WCCI----VVPVVFD-LVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANV 264
             |..:    |||.... |.|..:||||.:...||....||..|:.:||.  ..|.:|...|:.::
Zfish   191 GWRFMLGLSVVPAALQFLGFLFLPESPRWLLQKGFTQNALLVLRQIRGD--VDVEEEFESIRCSI 253

  Fly   265 EEA---MASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNS-------------QSIF 313
            :|.   :|....:..:..:...||||.:..||..||||:|||.|::.|             .:|:
Zfish   254 QEEQRDVAGGPVLWRMLASPPARRALIVGCGLQMFQQLAGINTVMYYSATILQMSGVQDDQMAIW 318

  Fly   314 ASANTGLDPAIATII-IGCVQ-VGSSALTPLVADRLGRKV--MLLTSSSVMS------------- 361
            .:|.|.....:.|:: :..|: ||...||  :|..||..|  |:|.:..::|             
Zfish   319 LAAGTAFTNFLFTLVGVWLVERVGRRRLT--MASLLGTAVSLMVLAAGFLLSAQASPPVTFHPSN 381

  Fly   362 --------------------------IGL--------------------AALGAFFYMQLVKG-- 378
                                      .||                    ||||..|     .|  
Zfish   382 PSIHNSTCGNYGFCESCMLDPDCGFCYGLNATAVVQSSCVPVDPANTETAALGRCF-----NGTQ 441

  Fly   379 DISSVVW----MPVP-------ALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWT 432
            ..|||.|    .|.|       .||:|...:..|.||:||.|..|::|...:|..::..|...|.
Zfish   442 KASSVFWAYNYCPTPYSWVVLLGLILYLAFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGVNWI 506

  Fly   433 LGFLVTFFYPSLDALGSYY-AFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            ...||:..:..:....:|| ||:|:|...::.|.||...:.|||||.|::|:
Zfish   507 CNVLVSLTFLHVAQYLTYYGAFFLYAALALLGFVFVSGCLPETKGLRLEEIE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 140/541 (26%)
MFS 47..460 CDD:119392 130/514 (25%)
slc2a13bXP_005163236.1 Sugar_tr 38..561 CDD:278511 141/541 (26%)
MFS 40..542 CDD:119392 131/521 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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