DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and slc2a1a

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001034897.1 Gene:slc2a1a / 555778 ZFINID:ZDB-GENE-030131-3158 Length:488 Species:Danio rerio


Alignment Length:491 Identity:141/491 - (28%)
Similarity:232/491 - (47%) Gaps:63/491 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSE----DTSDSPLSR--PI 84
            |.|.:.::|:      :.||...|.:.:...|...|..:  .|:...|    :|..:..|.  |.
Zfish     2 ESNKKEVTPQ------LMMAVGTAVIGSLQFGYNTGVIN--APQKIIEGFYNETWHNRYSEYIPP 58

  Fly    85 TSDEDAWISS--LIAVGALVAPFVAGPMADRIGRK-WVLLSSSLFFVLA--FGLNMVASEVWILY 144
            |:....|..|  :.:||.::..|..|...:|.||: .:|:::.|.|:.|  .|.:.:|....:|.
Zfish    59 TTLTTLWSVSVAIFSVGGILGSFSVGLFVNRFGRRNSMLIANILAFIAAAFMGFSKLAESWEMLI 123

  Fly   145 MSRLI----QGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGIL--YVYAIGPYVSYQA 203
            :.|.|    .|...|||    |||||||:..::|||.|:|.||.||.|||  .::.|...:....
Zfish   124 IGRFIVGLYSGLSTGFV----PMYVGEIAPTSLRGALGTLHQLGIVIGILMAQIFGIKEIMGSPT 184

  Fly   204 LQWCCIV----VPVVFDLVFY-MMPESP-YFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQA 262
            | |..::    :|.|...... ..|||| |....:..:::|...|:.|||  .:.|..:|.|::.
Zfish   185 L-WPFMLGFTFIPAVLQCALLPFCPESPRYLLINQNEEAKAKSVLKKLRG--TDDVGADMQEMRD 246

  Fly   263 NVEEAMASKG-TVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIAT 326
            ...:.|..|. |:.:||:::..|:.:||...|...||.||||.|.:.|..||..|... :|..||
Zfish   247 ESRQMMREKTVTIPELFRSSLYRQPIFIAIMLQLSQQFSGINAVFYYSTGIFEKAGVS-EPVYAT 310

  Fly   327 IIIGCVQVGSSALTPLVADRLGRKVM-------LLTSSSVMSIGLAALGAFFYMQLVKGDISSVV 384
            |..|.|....:.::..:.:|:||:.:       :..||.:|:|.:|.|             :.|.
Zfish   311 IGAGAVNTAFTVVSLFIVERVGRRSLHLVGLMGMAVSSVLMTIAMALL-------------TKVE 362

  Fly   385 WMPVPALI-IYNIV--YCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDA 446
            ||...::: |::.|  :..|.||:||.::.|:|....:..|.:|...:.|...|||...:..::.
Zfish   363 WMSYVSIVAIFSFVAFFEIGPGPIPWFIVAELFSQGPRPSAFAVAGFSNWFANFLVGMCFQYVEE 427

  Fly   447 LGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
            |...|.|.:|.|.:::.|.|..|.|.||||.|.::|
Zfish   428 LTGPYVFIIFTVLLLIFFVFTYFKVPETKGRSFEEI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 137/473 (29%)
MFS 47..460 CDD:119392 126/446 (28%)
slc2a1aNP_001034897.1 Sugar_tr 18..467 CDD:278511 136/469 (29%)
MFS 62..450 CDD:119392 119/408 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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