DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and slc2a12

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_956832.1 Gene:slc2a12 / 393510 ZFINID:ZDB-GENE-040426-1513 Length:610 Species:Danio rerio


Alignment Length:577 Identity:126/577 - (21%)
Similarity:223/577 - (38%) Gaps:140/577 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 REGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTSDSPLSRPITSDED 89
            :.||.|.:         :..:...|.||..::|..:...|  |..|:..|.  ..||.|   :::
Zfish    36 KSGNGRAL---------VLCSVSVACLSGLLMGYEMSLIS--GALLQLRDV--LTLSCP---EQE 84

  Fly    90 AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGV 154
            ..:.||: :||.:.....|.:.|..||::.::.::|..||...|::.....|.|.:.|::.|..|
Zfish    85 QVVGSLL-LGAFLLSLGGGTILDHYGRRFTIILTALLCVLGTLLSVCVVSFWALVVGRMLVGMSV 148

  Fly   155 GFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWCCIVVPVVFDLVF 219
            ....|...:|..|::....||....:.:|.:|.|:|..:         .|.|....||..:...|
Zfish   149 ALSGTASCLYAAEVAPAAWRGRCVCVYELMVVLGMLLGF---------GLSWAFAGVPDGWRFTF 204

  Fly   220 --------------YMMPESPYFFAGKGRKSEALKSLQFLRG--QSAEGVHDEMAEIQANVEEAM 268
                          .::|:||.|...:.|:.||..:|..||.  :..|.|.||:..|:.    ||
Zfish   205 GGALLPALLQAGVMPLLPDSPRFLLAQQREKEAHATLLRLRAGIKEVEPVEDELRAIRL----AM 265

  Fly   269 ASKGT--VMDLFKNAGNR-RALFICAGLISFQQLSGINVVLFNSQSIFASAN-TGLDPA-IATII 328
            .::..  .:|||::..|. :.|.:.|.|:..||.:|...:|..:.::.:|.. .|.:.| :|:..
Zfish   266 GAERLHGFLDLFQSRDNMLQRLLVGAALVFLQQATGQPNILAYASTVLSSVGFHGNEAATLASTG 330

  Fly   329 IGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAF----------------------- 370
            .|.|:||.:.....:.|::|.|.:|.....||.:..|.|||.                       
Zfish   331 FGVVKVGGTIPAIFLVDKVGPKALLCVGVVVMMLSTATLGAITMQSRTHVSSLCRGPGNTANFTL 395

  Fly   371 ----------------FYM-------------------------------------QLVKGDIS- 381
                            .|.                                     :|.|.|.: 
Zfish   396 FETGDETDIQTNTPLGLYQPQNKLKTNAFLTSINDTREHWILNHTYDHRTALIETAELSKKDSAK 460

  Fly   382 -----------SVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGF 435
                       |:.|:.:.:|::|...:....||:...||..:||..|:..|.||:::..|....
Zfish   461 IALQSLHEVSPSLKWISLVSLLVYVAGFSISLGPMVHVVLSAIFPTGIRGKAVSVISAFNWATNL 525

  Fly   436 LVTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQDRLNGKRN 491
            |::..:.:| :.:|.....:.::....:...||:..|.||||.||:||...|..|.:
Zfish   526 LISMTFLTLTERIGLPTVIFSYSAMSFLLVVFVIVFVPETKGRSLEQISKELAMKNH 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 119/549 (22%)
MFS 47..460 CDD:119392 110/522 (21%)
slc2a12NP_956832.1 MFS 48..395 CDD:119392 88/367 (24%)
SP 49..573 CDD:273317 119/544 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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