DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and ght8

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_587746.1 Gene:ght8 / 2539300 PomBaseID:SPCC548.06c Length:547 Species:Schizosaccharomyces pombe


Alignment Length:454 Identity:108/454 - (23%)
Similarity:208/454 - (45%) Gaps:35/454 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GW-----TSPIGPKLKSEDTSDSPLSR--PIT------SDEDAWISSLIAVGALVAPFVAGPMAD 112
            ||     |..||......|.......|  |:|      |.....|:.::.||::....::.|:.|
pombe    17 GWMFGADTGSIGGITNMRDFQSRFADRYNPVTDTYSYSSARQGLITGMVNVGSMTGCILSSPLMD 81

  Fly   113 RIGRKWVLLSSSLFFVLAFGLNMVASEVWI-LYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGA 176
            |||::..::..::.:::...|.:.|...|: :.::::..|..:|.:..:.|.:..|::...:||.
pombe    82 RIGKRVSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGT 146

  Fly   177 TGSLMQLFIVGGILYVYAI--GPYVSYQALQW-CCIVVPVVFDLVFYM----MPESPYFFAGKGR 234
            ..:..||.:.|||.....|  |.:..::..|| ..:.:.:::.::.::    :||||.:....|:
pombe   147 IVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIIMFIGISFLPESPRYLIAIGK 211

  Fly   235 KSEALKSL--QFLRGQSAEGVHDEMAEIQANVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQ 297
            ..|||..:  ..:..:..|.:..|...|:.:.|..||...........|..|...|:..|::|.|
pombe   212 DEEALDIMCKNNVLPREHEIIQTEYHVIKTDCEAEMAGGPATWGDILGADIRYRTFLGLGVMSLQ 276

  Fly   298 QLSGINVVLFNSQSIFASANTGLD-PAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMS 361
            ||:|.|...:....:|  ..||:: |.::.:|:..|..|.:.....|.:..||::.|:......|
pombe   277 QLTGDNYYFYYGFEVF--EGTGMNSPYLSALILDAVNFGCTFGGLFVLEFFGRRMPLIIGGVWQS 339

  Fly   362 IGLAALGAFFYMQLVKGDISS-----VVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSV 421
            |......|.....|.:.:.:|     .|.:....|.|::  :...:||..:.::||.:|...:|.
pombe   340 ITFFIYAAVGNRALTRKNGTSNHRAGAVMIVFSCLFIFS--FAQTWGPAAYVIVGESYPIRYRSK 402

  Fly   422 ASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQD 484
            .::|..:..|..|||:|||.|.: |::|..|.: :||.|.:.|...:.....|||||:|::|.:
pombe   403 CAAVATTGNWLWGFLITFFTPFISDSIGFKYGY-IFAACNLCAACIIFLFAHETKGLTLEEINE 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 107/450 (24%)
MFS 47..460 CDD:119392 99/428 (23%)
ght8NP_587746.1 MFS 10..451 CDD:119392 101/438 (23%)
Sugar_tr 11..467 CDD:278511 108/454 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9279
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
43.800

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