DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and slcf-2

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_508586.2 Gene:slcf-2 / 192084 WormBaseID:WBGene00006865 Length:595 Species:Caenorhabditis elegans


Alignment Length:395 Identity:85/395 - (21%)
Similarity:163/395 - (41%) Gaps:90/395 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 AW---ISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASE----VWILYMSR 147
            ||   :||.| .|..:..|||..|:.|.|||..::..::..|:...|.::.:.    |.:..:.|
 Worm   113 AWEMLVSSRI-YGLAIGCFVAVLMSHRHGRKLPVVVGTILDVIGVVLTLLITSVPHGVTVATVGR 176

  Fly   148 LIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFI----VGGILYVYAIGPYVSYQAL-QWC 207
            ||.|.|.|.|.|...:.:.|:.....||...:.:.::.    :||:  ..::..:.....| ||.
 Worm   177 LINGIGQGMVQTAGSVMLSELPPLKTRGTVLATLTMWACMGELGGM--TISLDEFFGTPELWQWA 239

  Fly   208 -----CIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEA 267
                 .:::|.:  :|.:..||||.:...:.|:.||.|::.:         :...|:.:.::||.
 Worm   240 MGFPLLLLLPAL--VVIWHAPESPRYLFIENREDEARKAMSY---------YQSPADCKQSIEEI 293

  Fly   268 MASKGTVMDLFK-----NAGNR---------------------RALFICAGLISFQQLSGINVVL 306
            :..|...|::.|     |...|                     |||.|...:.:|..|.....:.
 Worm   294 LLEKQFTMEMIKEKVDENGNTRKKEPAGLLSSICERLKDGRFTRALLIALFVQTFVHLDDWLWIS 358

  Fly   307 FNSQSIF------------ASANTGLDPAIATI-IIGCVQVGSSALTPLVADRLGRKVMLLTSSS 358
            :::| ||            ||....|..|:.:| ::||.            |...|:.:|:..:.
 Worm   359 YSTQ-IFENFGLTSGKAQTASLIMSLPQAVISIALLGCF------------DNFDRRTLLIVPTI 410

  Fly   359 VMSIGLAALGAFFYMQLVKGDISSVV--WMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSV 421
                 |:.:..|..:......:|:|:  ::.:|.|..:::......|...:|::.|:|.||.|.:
 Worm   411 -----LSVIFGFLAIVFSSPGLSNVIPLFVIIPILATFDLSVAAISGESAYAIVPELFLANDKVL 470

  Fly   422 ASSVV 426
            .|::|
 Worm   471 GSAIV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 85/395 (22%)
MFS 47..460 CDD:119392 85/395 (22%)
slcf-2NP_508586.2 MFS 110..532 CDD:391944 85/395 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3740
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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