DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and Y39B6A.41

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_741656.2 Gene:Y39B6A.41 / 189732 WormBaseID:WBGene00012699 Length:511 Species:Caenorhabditis elegans


Alignment Length:475 Identity:107/475 - (22%)
Similarity:201/475 - (42%) Gaps:108/475 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 LKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLN 134
            ::||:|.::..|.         .:|.:.:|..::..:.|.:.|.:|||..:|..|...::. .:.
 Worm    50 VESEETFETIFSA---------CASFMFIGLAISFAIMGKLMDGLGRKETILLRSFLGIIG-SMA 104

  Fly   135 MVAS------EVWIL--YMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFI-VGGIL 190
            |:.|      |.:::  .::.::|||.|..:     :::.|.|.|:.||.|    .||| .||::
 Worm   105 MLTSLLLNRFEFYVIGHLIAGMLQGFRVVLI-----IWIAECSPDSKRGLT----SLFINSGGVI 160

  Fly   191 YVYAIGPYV-----SYQALQWC---CI--VVPVVFDLVFYMMPESP-YFFAGKGRKSEALKSLQF 244
            ....:.|..     ..:|| |.   ||  ::..:..::...:|:|| :.|..|..::.|.::|:|
 Worm   161 MTLLVTPLCLPSIWGNEAL-WVFLPCITALLATIHLILTIFLPKSPKHLFIQKSDEAGARRALRF 224

  Fly   245 LRGQSAEGVHDEMAEIQANVEEAMASKGT--VMDLFKNAGNRRALFI---CAGLISFQQLSGINV 304
            ..|...|...||..:...: |...|.|.|  ::|:.:|..:|.:||:   |:.:..|   ||:|:
 Worm   225 YYGDENEKKIDEAIKEMIH-ENKQAKKETSGILDILQNRNHRFSLFLVFMCSLVPVF---SGLNI 285

  Fly   305 VLFNSQ----SIFASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLA 365
               .||    .:.:...|..:..||.::|..|.:..|.:.||:.::.||:.:.:.        |.
 Worm   286 ---KSQYLVDILISYGLTQSNSTIAIMVINTVSLPVSFIAPLIIEKYGRRPIFVL--------LT 339

  Fly   366 ALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFG---PLPW------AVLG---------- 411
            .|.||.::           .|.:|.:       ...||   ...|      |:||          
 Worm   340 WLCAFEWL-----------GMSIPEM-------ANNFGWNIDFRWIFACFSAILGQCAVNLGMLV 386

  Fly   412 -------EMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLF 469
                   |:.|.||::..|.........:..|..|.:|:|.:...:..|...|.|.......:..
 Worm   387 MAPIMISELCPHNIRATVSQFTQVPPIGIAVLEVFMFPTLRSQFGFTMFLFLATCCAALATILHN 451

  Fly   470 VVMETKGLSLQQIQDRLNGK 489
            .::||.||::.:|..||:|:
 Worm   452 QMLETAGLAVDEIFSRLSGE 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 103/466 (22%)
MFS 47..460 CDD:119392 98/444 (22%)
Y39B6A.41NP_741656.2 MFS 28..458 CDD:391944 101/460 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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