DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and F48E3.2

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_509266.1 Gene:F48E3.2 / 185981 WormBaseID:WBGene00018603 Length:488 Species:Caenorhabditis elegans


Alignment Length:486 Identity:112/486 - (23%)
Similarity:215/486 - (44%) Gaps:71/486 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IFMAAVAANLSAFVVGTTLGW-TSPIGP-KLKSEDTSDSPLSRPITSDEDAWISSLIA---VGAL 101
            :.::||.|..:.|.:|.|..: .:.||. ::...::::.|.:...:..|.|| |:::|   :|..
 Worm     9 LILSAVLAITAIFQMGYTNAYPNTAIGSFRIFLNESANEPYTLSNSEFEWAW-SAMLAIYFIGFA 72

  Fly   102 VAPFVAGPMADRIGRKWVL-------LSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMT 159
            ....::..:||||||||.|       |.|||..:.|..|.|..    :...|||:........|.
 Worm    73 AGSVISAGVADRIGRKWTLFLGTCGSLLSSLIALFAIILKMPL----MFGFSRLVMSLSAAISMN 133

  Fly   160 VQPMYVGEISTDNVRG-----ATGSLMQLFIVGGILYVYAI--GPYVSYQALQWCCIVVP---VV 214
            ...:...|.|..::||     |..:.:...::||:..:.:|  ...|...|:.    ::|   ..
 Worm   134 GLILLFQESSPSHMRGLISFNAEMAFVITNLIGGLFGMQSILGQNIVGLIAVS----IIPSSVAC 194

  Fly   215 FDLVFYMMPESP-YFFAGKGRKSEALKSLQFLRGQSAEGVHDE------MAEIQANVEEAMASK- 271
            |..||  :.||| |.|..|...:||.::|||.     :.:.||      :.:::...||....| 
 Worm   195 FLTVF--LKESPKYLFLKKHDATEAGRALQFY-----QNIKDEEEKMNVLNDLKLEKEEMGHQKN 252

  Fly   272 GTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTG--LDPAIATIIIGCVQV 334
            |::.|:..|...||...:  ||.:.|..:.:..|:|.|......|...  |..:::|.::....:
 Worm   253 GSLFDIMANQPVRRGFLL--GLATMQLTASVWPVVFYSTDFLMDAGFSYELSESVSTGMLFLSSL 315

  Fly   335 GSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISSVV-----WMP---VPAL 391
             |:.:...:.::..||.:|:.::||   .:||:..|        .:|:::     |:.   :..|
 Worm   316 -STIVGMFIVEKYSRKWLLIGTASV---NIAAILVF--------SLSAILSHYWTWIGYGCIICL 368

  Fly   392 IIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFF-YPSLDALGSYYAFWL 455
            |::.|.|....||:.|.:..|:.|.|.::.:.|:|.:...|:..::.|. :|....:|.......
 Worm   369 ILHGISYSVAMGPIAWFITSELVPINFRAASQSLVLALNHTVALVLAFLTFPLYKTIGPITLVIF 433

  Fly   456 FAVCMVVAFFFVLFVVMETKGLSLQQIQDRL 486
            |.:..::....::..:.|||...:..|.::|
 Worm   434 FVIPGILCIIMLILYLPETKDKHINVIVEQL 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 110/480 (23%)
MFS 47..460 CDD:119392 106/453 (23%)
F48E3.2NP_509266.1 MFS_GLUT_Class1_2_like 12..455 CDD:340915 110/472 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52445
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.