DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and C03B1.13

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_509061.3 Gene:C03B1.13 / 180910 WormBaseID:WBGene00015381 Length:506 Species:Caenorhabditis elegans


Alignment Length:525 Identity:116/525 - (22%)
Similarity:198/525 - (37%) Gaps:120/525 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VQYSYTEVSTF---------QIREGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIG 67
            :.|..|.|.||         |.||..|..: ||     ..::|..:..:|.|..||.||:     
 Worm    27 ITYVNTSVDTFYKLARTAYKQSRECYTCQL-PE-----NDWLAQWSVTVSMFYPGTILGF----- 80

  Fly    68 PKLKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFG 132
                        |..|..:   .||....|.|.:......|     :|..::.||     .|:.|
 Worm    81 ------------LMVPFLT---KWIGVKRAQGIMCIAATIG-----VGVHFLALS-----FLSLG 120

  Fly   133 LNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQL-----FIVGGILYV 192
            ....|:   ||.:.||:.|...|..:.:.|:|:.|||..:.|....:..|:     .::|.:|..
 Worm   121 EVTFAT---ILSIGRLMIGLQAGSSLCLLPLYIIEISPAHYRSFLNNFQQVSQSFATLLGLVLGS 182

  Fly   193 YAIGPYVSYQ-ALQWCCIVVPVVFDL-VFYMMPESPYFFAGKGRK--SEALKSLQFLRGQSAEGV 253
            ..|.|..|.: .:.....|:|::|.| |..:.|.:|.:.:....:  .||:.|..|..|......
 Worm   183 EEILPLGSSRFFIMQISAVIPILFLLFVLIITPPTPNYLSHFHPECIHEAIHSKLFYHGTERSNS 247

  Fly   254 HDEMAEIQANVEEAMASKGTVMDLFKNAGNR-----RALFICAGLISFQQLSGINVV-LFNSQSI 312
            :..:......:|....||      :.|.|..     :...|.|.:.:....:|.::: .|:|..:
 Worm   248 YRPLISNYEMMENKFTSK------YANYGKSWRESFKGFLIGAIVAASYAFTGDDLIDTFSSNML 306

  Fly   313 F----ASANTGLDPAIATIII----GCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGL----- 364
            .    :|..........||::    |.|...:|.....:|||.||:.::|       :||     
 Worm   307 IGEEKSSKKIHQTTDTFTILVSDGLGLVLFFASLFGIYLADRFGRRKLVL-------VGLFGTCV 364

  Fly   365 AALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCT-------GFGPLPWAVLGEMFPAN----I 418
            |.:||..:               ....:|.::.:..       |.|...|.:..|:....    .
 Worm   365 ANIGAVVF---------------TTNKVIVSLCFAATKTFIGIGCGGPAWFLTSELVDPEYAWIF 414

  Fly   419 KSVASSVVASTCWTLGFLVTFFYPSLDAL-GSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
            :.:::.::.||.    .:.||||.::|.| |.|....|.|...:||...:...:.||||.|.::|
 Worm   415 QPLSTGILLSTT----MIETFFYLTVDNLVGGYSLLILAAGPALVAAILIYLYLPETKGRSSEEI 475

  Fly   483 QDRLN 487
            |:.||
 Worm   476 QNMLN 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 101/479 (21%)
MFS 47..460 CDD:119392 93/452 (21%)
C03B1.13NP_509061.3 MFS 12..470 CDD:391944 110/513 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.