DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:581 Identity:148/581 - (25%)
Similarity:238/581 - (40%) Gaps:158/581 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 MAAVAA-------------NLSAFVVGTTLGWTSPIGPKLKSEDTS----------DSPLSRPIT 85
            |.||||             .|..||.  .|...|.||..|...|||          |:|..:|: 
 Worm     1 MVAVAAFSSSGQDKPAHTPKLGLFVY--ILAAASVIGGFLFGYDTSVVSAAMLYMPDAPGLKPM- 62

  Fly    86 SDEDAWISSLIAVG---ALVAPFVAGPMADRIGRKWVLLSSSLFF-----VLAFGLNMVASEVWI 142
              :..|...|:::.   |.|...::|..:|.|||:.|:|.:|..|     |.|..:|.:     :
 Worm    63 --DTVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKI-----M 120

  Fly   143 LYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRG---ATGSLMQLF------IVGGILYVYAIGPY 198
            |.:.|::.|..:||...:.|:|:||.:..:|||   |..:||..|      |.|| .:.| |.||
 Worm   121 LLVGRVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGG-AFSY-IDPY 183

  Fly   199 VSYQALQWCCIVVPVVFDLVFYM-MPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQA 262
            .....|.:....||.:...|.:| :||:|.:....|.::|..:.|:.:.....|.|..|||||.|
 Worm   184 NVGWRLMFAFAAVPSIIQFVCFMFLPETPRWLYENGFETETREVLEKVYNGDKEWVEYEMAEIIA 248

  Fly   263 -------NVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGL 320
                   ..|:|.||...:..:.|.....:|.||.:.|.:||||:|||.:|:.:..|..|  :|:
 Worm   249 FNEDQAKENEKAHASGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRS--SGI 311

  Fly   321 DPAIATIIIG-----CVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDI 380
            .....||.|.     |..:|......|: :::||:::.|.|..::.:.|..:|..|.  ||..|.
 Worm   312 SNNHTTIWISVLLSLCNFIGPFVPMSLI-EKVGRRIIFLFSCGLVVLSLVFIGVAFL--LVNHDS 373

  Fly   381 SSVV------------------------------------------------------------- 384
            ::.:                                                             
 Worm   374 AATLPANQYGSNFNSSYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSST 438

  Fly   385 ---------------W-----------MPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVAS 423
                           |           :|:.|..:|.:.:.:||..|||.:..|.:|...:|...
 Worm   439 GSCTNSNGSIANNFKWEKYYCDTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCV 503

  Fly   424 SVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            ::..::.|....::...|.|| ..:|.|.||||:|...|:||.|:||:|.||||.|:::::
 Worm   504 AISTTSNWVFNLIIALTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVE 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 148/578 (26%)
MFS 47..460 CDD:119392 134/553 (24%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 134/537 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3740
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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