DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and Y39E4B.5

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_499720.1 Gene:Y39E4B.5 / 176735 WormBaseID:WBGene00012716 Length:505 Species:Caenorhabditis elegans


Alignment Length:499 Identity:123/499 - (24%)
Similarity:215/499 - (43%) Gaps:76/499 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IFMAAVAANLSA---FVVGTTLGWTSPIGPKL-KSEDTSDSPLSRPITSDED------------A 90
            |.:.::.|.|||   |..|.|....:....|| |...||   |.:|...|::            .
 Worm     6 IRLISIYAALSAITNFPSGFTNSSVNTAVEKLHKFIATS---LRQPGVPDDENTIALFQSATLNC 67

  Fly    91 WISSLIAVGALVAPFVAGPMADRIGRKW---VLLSSSLF--FVLAFGLNMVASEVWILYMSR--- 147
            |..:.| .||::.|.:    :|..|||:   |.:::::|  ||..|.:.....  |.|.:.|   
 Worm    68 WFVAQI-FGAIMTPMI----SDGYGRKFGYIVCVTTTIFATFVQYFSICFYMP--WGLILGRSLT 125

  Fly   148 -LIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQ-----LFIVGGILYVYAI-GPYVSYQALQ 205
             |:...|...::    :||.|.|...:||.:..|.:     :.::|.:|.:.:: |..:|...| 
 Worm   126 ALVSPLGDACLL----LYVQETSPLEIRGMSSFLCEIGYGTMCVLGMVLGMKSVLGESLSRLLL- 185

  Fly   206 WCCIVVPVVFDLVFYM-MPESPYF-FAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQA-NVEEA 267
              ..::|:...|.|.: :||:|.| ...:..:.:|||||:|.:|:|::..: .|:|.|| .:.:.
 Worm   186 --LSLIPLFCSLCFIVRIPETPKFLMIMRNDREKALKSLEFFQGESSDNAY-IMSEYQAEKMTDK 247

  Fly   268 MASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPA-IATIIIGC 331
            ::...|.:||......|:|:.:....:|. .|| ...:|.:|......:...:|.| |.:.:...
 Worm   248 LSQDSTFVDLLSKWHLRQAMRLALATLSL-TLS-FYPILQSSTYFLLESGVSVDMAQICSTMAQV 310

  Fly   332 VQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISSVVWMPVPALIIYNI 396
            |...||.....:.||..|:.:|:|...:.::.|.|..  |:..|....:|...| |..|.:...:
 Worm   311 VLTLSSICGASIIDRFSRRKLLITFGILSNVLLVAFS--FFSHLSATVVSPYSW-PKYACLASLL 372

  Fly   397 VYCTGF----GPLPWAVLGEMFPANIKSVASSVVASTCWTLGFL---VTFF--YPSLDALGSYYA 452
            .||..|    |||.|.|..|:    :.......:.|.|:.:..|   :|.|  .|.....||...
 Worm   373 AYCISFGMVLGPLSWFVAPEL----VSQRHRCTIFSACFAIHNLLIALTDFATIPLFRIFGSMCF 433

  Fly   453 FWLFAVCMVVAFFFVLFVVMETKGLS----LQQIQDR-LNGKRN 491
            .:||.|.......::...:.||.|.|    :.::.|| |:|..:
 Worm   434 VFLFVVPSFFCLCYIYLFMPETLGKSTLDIIHEMIDRGLHGSEH 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 119/487 (24%)
MFS 47..460 CDD:119392 114/456 (25%)
Y39E4B.5NP_499720.1 MFS 13..458 CDD:391944 116/471 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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