DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and fgt-1

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_493982.1 Gene:fgt-1 / 173525 WormBaseID:WBGene00019207 Length:510 Species:Caenorhabditis elegans


Alignment Length:512 Identity:154/512 - (30%)
Similarity:247/512 - (48%) Gaps:53/512 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SISREEETGVQYSYTEVSTFQIREGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIG 67
            |:|...::...||....:|.:|       :.|:...:..:..:|....|::|..|..:|..:..|
 Worm    14 SLSDSSKSPSSYSTPGTTTQKI-------IFPDGKLTKCLAFSAFVITLASFQFGYHIGCVNAPG 71

  Fly    68 PKL------KSEDTSDSPLSRPITSDEDAW--ISSLIAVGALVAPFVAGPMADRIGRKWVLLSSS 124
            ..:      ..:|..|..|||  .:.:.||  ..|:.|||.::....:|.:||::||:..|..::
 Worm    72 GLITEWIIGSHKDLFDKELSR--ENADLAWSVAVSVFAVGGMIGGLSSGWLADKVGRRGALFYNN 134

  Fly   125 LFFVLAFGLNMVASEVW---ILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIV 186
            |..:.|..|..:|..|.   ::.:.|||.|...||...:.||::.|||.:|:||..|||.||.:.
 Worm   135 LLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVT 199

  Fly   187 GGILYVYAIG-PYVSYQALQWCCI----VVPVVFDLVFYMM-PESP-YFFAGKGRKSEALKSLQF 244
            ..||.....| |::.....:|..|    |||.|..|...|: |||| |..|.:|:::||..:|:.
 Worm   200 IAILVSQIFGLPHLLGTGDRWPLIFAFTVVPAVLQLALLMLCPESPKYTMAVRGQRNEAESALKK 264

  Fly   245 LRGQSAEGVHDEMAEIQANVEEAMAS----KGTVMDLFKNAGNRRALF---ICAGLISFQQLSGI 302
            ||     ...|...||:|..|||.|:    |..:.|:||.|    .|:   |...::..||||||
 Worm   265 LR-----DTEDVSTEIEAMQEEATAAGVQEKPKMGDMFKGA----LLWPMSIAIMMMLAQQLSGI 320

  Fly   303 NVVLFNSQSIFASAN-TGLDPAIATIIIGCVQVGSSALTPLVAD--RLGRKVMLLTSSSVMSIGL 364
            ||.:|.|..||..|. ||.:|..|||.:|.|.|..:.::..:.|  :.||:.:||...:.|.:..
 Worm   321 NVAMFYSTVIFRGAGLTGNEPFYATIGMGAVNVIMTLISVWLVDHPKFGRRSLLLAGLTGMFVST 385

  Fly   365 AALGAFFYMQLVKGDISSVVWMPVPAL---IIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVV 426
            ..|.....:|...||    .|....|:   :::.|.:.||.|.:||..:.|:|.::.:..|:|:.
 Worm   386 LLLVGALTIQNSGGD----KWASYSAIGFVLLFVISFATGPGAIPWFFVSEIFDSSARGNANSIA 446

  Fly   427 ASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            ....|....||...:..::.|...|:|::|:..:....|:....|.||||.|::|||
 Worm   447 VMVNWAANLLVGLTFLPINNLMQQYSFFIFSGFLAFFIFYTWKFVPETKGKSIEQIQ 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 144/470 (31%)
MFS 47..460 CDD:119392 136/443 (31%)
fgt-1NP_493982.1 Sugar_tr 50..506 CDD:278511 147/469 (31%)
MFS 100..491 CDD:119392 125/403 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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