DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and slc2a13

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_004913061.2 Gene:slc2a13 / 100485871 XenbaseID:XB-GENE-492054 Length:646 Species:Xenopus tropicalis


Alignment Length:558 Identity:129/558 - (23%)
Similarity:220/558 - (39%) Gaps:116/558 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTSDSPLSRPITSDEDA 90
            |...|....:.|....:::.:|.:.|..|:.|...|..|.....||.|....:           .
 Frog    63 ERAARKQFQQDVTPAFVYVVSVFSALGGFLFGYDTGVVSGAMLLLKREMNLSA-----------L 116

  Fly    91 W----ISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQG 151
            |    :||.:...||.| ...|.:...:||:..:|.:||.|.....:...|.:...|...|::.|
 Frog   117 WQELLVSSTVGAAALSA-LAGGVLNGVLGRRPCILMASLLFTAGAVILAAARDKETLLGGRVVVG 180

  Fly   152 FGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQ-WCCIV----V 211
            .|:|......|:|:.|.:..::||...::..|||.||......:....||.|.. |..::    |
 Frog   181 LGIGIASMTVPVYIAEAAPPHLRGRLVTINTLFITGGQFSAAVVDGAFSYLARDGWRYMLGLSAV 245

  Fly   212 PVVFD-LVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEAMASKGT-- 273
            |.|.. |.|..:||||.:...||:..:|.:.|..:||.  :.:.:|...|:.:::|......|  
 Frog   246 PAVLQFLGFLFLPESPRWLIQKGQTQKARRVLSQIRGN--QTIDEEYDSIKNSIDEEEKEGATGG 308

  Fly   274 --VMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGS 336
              :..:......||||.:..||..||||:|||.|::.|.:|...  :|:|.....|.:..|...:
 Frog   309 PIIYRMLIYPPTRRALIVGCGLQMFQQLAGINTVMYYSATILQM--SGVDDDRLAIWLAAVTAFT 371

  Fly   337 S-ALTPL---VADRLGRKVMLLTS--SSVMSIGLAALGAFFYMQL-------------------- 375
            : :.|.|   :.::|||:.:.|.|  .:.:::.:.|||.....|:                    
 Frog   372 NFSFTLLGVWLVEKLGRRKLTLGSLTGTTVALFVLALGFLLSAQVSPPVTFTPGDPSGPNSTCTQ 436

  Fly   376 ----------------VKGDISSVV---------------------------------------- 384
                            .|.:.||:|                                        
 Frog   437 YSYCNKCMLDPNCGFCYKKNGSSIVDSSCIPVNTESTDRAAWGRCMNETKSKAGGSIWAYNYCPT 501

  Fly   385 ---WMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTF-FYPSLD 445
               |..:..||:|.:.:..|.||:||.|..|::|...:|..::..:...|....|::. |..:.:
 Frog   502 SYSWTALLGLILYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSSGVNWICNVLISLTFLHTAE 566

  Fly   446 ALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            .|..|.||:|:|....|...|:...:.||||..|::|:
 Frog   567 YLTYYGAFFLYAGLACVGLIFIYGCLPETKGKKLEEIE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 125/539 (23%)
MFS 47..460 CDD:119392 118/512 (23%)
slc2a13XP_004913061.2 MFS_HMIT_like 85..594 CDD:340918 119/524 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.