DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and LOC100334818

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_002665301.2 Gene:LOC100334818 / 100334818 -ID:- Length:484 Species:Danio rerio


Alignment Length:475 Identity:128/475 - (26%)
Similarity:218/475 - (45%) Gaps:46/475 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IFMAAVAANLSAFVVGTTLGWTSPIGPKLKSED----TSDSPLSRPITSDEDAWISSL-IAV--- 98
            :..:.|||.|.:..:|...|..:|  |....|:    |..|..::.|......::.|| :::   
Zfish    12 LLTSIVAAVLGSLQIGYQTGNINP--PARVIEEFFNTTWRSRHNQSIPDHSLTFLWSLSVSIKDF 74

  Fly    99 GALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVW----ILYMSRLIQGFGVGFVMT 159
            |||:.......:||..||:..:|.::...|....| |..||..    :|.:.|||.|...|.||:
Zfish    75 GALLGSLGVKGLADTFGRRNAILIANALSVAGASL-MFMSEATASFEVLIVGRLIFGLFCGLVMS 138

  Fly   160 VQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYV-----SYQALQWCCIVVPVVFD-LV 218
            :.|:|:..:|..|:|||..:|.|:|...|||....:|...     .|.:|.....::|.... |.
Zfish   139 LNPLYIQGVSPTNLRGAFATLNQVFFASGILLGMVVGLETVLGTEKYWSLMLSLSLIPATLQYLT 203

  Fly   219 FYMMPESP-YFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEAMASKG--TVMDLFKN 280
            ....|||| |.|..:|::.||..:|:.||| :.|.|..||.|::   |||..|:.  ||.:..:.
Zfish   204 LPFCPESPRYLFINRGKEEEAEAALRRLRG-NPEMVMKEMEEMR---EEAAHSETGVTVREFLRK 264

  Fly   281 AGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPA-IATIIIGCVQVGSSALTPLVA 344
            ...|:.:.:...:....||||.|.::..|..:||.:|  .|.| ..|:.:|.|.|..:.:...:.
Zfish   265 RRYRQPIILVLIINLGSQLSGFNAIINYSTKMFAQSN--FDEATYLTLGVGAVNVAFTIVAFFLV 327

  Fly   345 DRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISSVVWMP----VPALIIYNIV--YCTGFG 403
            :|.||:.:||.       |..:|.....:..:...|.::|  |    :..|:::.::  |..|.|
Zfish   328 ERAGRRKLLLA-------GFLSLAICNLLMTITYSILTIV--PFIRNIQVLVVFFLISAYEVGPG 383

  Fly   404 PLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVL 468
            |:.|.:..|:|..:.:.:|.:..:...|...|::...:|.|..:...|.:.||....::||.:.:
Zfish   384 PISWFIAAELFDQSARPIAMAFTSMLNWGGKFVLALLFPPLLKICGAYVYLLFMCMALLAFTYTM 448

  Fly   469 FVVMETKGLSLQQIQDRLNG 488
            |.:.||||.:...|.....|
Zfish   449 FRLPETKGRTFDDIAAEFRG 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 126/467 (27%)
MFS 47..460 CDD:119392 119/440 (27%)
LOC100334818XP_002665301.2 Sugar_tr 19..466 CDD:278511 125/464 (27%)
MFS 66..449 CDD:119392 109/398 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.