DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and slc2a1b

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_002662574.1 Gene:slc2a1b / 100321338 ZFINID:ZDB-GENE-090915-1 Length:489 Species:Danio rerio


Alignment Length:457 Identity:131/457 - (28%)
Similarity:208/457 - (45%) Gaps:77/457 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 WTSPIGPKLKSEDTSDSPLSRPITSDEDAWISS--LIAVGALVAPFVAGPMADRIGRK-WVLLSS 123
            ||:..|..:..            |:....|..|  :.:||.:|..|..|...:|.||: .:|:::
Zfish    47 WTARHGDMISK------------TTMTTLWSLSVAIFSVGGIVGSFSVGLFVNRFGRRNSMLMAN 99

  Fly   124 SLFFVLA--FGLNMVASEVWILYMSR----LIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQ 182
            .|.|:.|  .|.:.:|:...:|.:.|    |..|...|||    ||||||::...:|||.|:|.|
Zfish   100 VLAFIAAALMGFSKMAASWEMLIIGRFVVGLYSGLSTGFV----PMYVGEVAPTALRGALGTLHQ 160

  Fly   183 LFIVGGILYVYAIG-----------PYV----SYQALQWCCIVVPVVFDLVFYMMPESPYF-FAG 231
            |.||.|||.....|           |::    ...||..||: :|:        .||||.| ...
Zfish   161 LGIVVGILMAQVFGMEAIMGNATMWPFLLGFTFIPALVQCCL-LPI--------CPESPRFLLIN 216

  Fly   232 KGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEA----MASKGTVMDLFKNAGNRRALFICAG 292
            :..:|:|...|:.|||.:     |..|::|...||:    ...|.|:.:||::...|:.:.|...
Zfish   217 RNEESKAKSVLKKLRGTT-----DVSADMQEMKEESRQMMREKKVTIPELFRSPLYRQPIVIAIM 276

  Fly   293 LISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLT-- 355
            |...|||||||.:.:.|..||..|.. ..|..|||..|.|....:.::..|.:|.||:.:.|.  
Zfish   277 LQLSQQLSGINAIFYYSTKIFEKAGV-QQPVYATIGAGVVNTAFTVVSLFVVERAGRRSLHLLGL 340

  Fly   356 -----SSSVMSIGLAALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFP 415
                 |:.:|:|.:|.|..:.:|.          :|.:.|:..:...:..|.||:||.::.|:|.
Zfish   341 LGMAGSAILMTIAIALLEKYDWMS----------YMSIVAIFAFVAFFEIGPGPIPWFIVAELFS 395

  Fly   416 ANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQ 480
            ...:..|.:|...:.||..|:|...:..::.:...|.|.:|.|.::..|.|..|.|.||||.:..
Zfish   396 QGPRPSAFAVAGFSNWTANFIVGMCFQYVEEVCGAYVFVIFTVFLLCFFIFTYFKVPETKGRTFD 460

  Fly   481 QI 482
            :|
Zfish   461 EI 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 130/455 (29%)
MFS 47..460 CDD:119392 122/433 (28%)
slc2a1bXP_002662574.1 Sugar_tr 17..466 CDD:278511 131/457 (29%)
MFS 61..449 CDD:119392 120/416 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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