DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and SIT1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:437 Identity:90/437 - (20%)
Similarity:157/437 - (35%) Gaps:130/437 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFA 153
            ::|.|..:.:...:..||::.::   |.:|.|    .::|..| |::.|::.|.|.         
Yeast    99 TSSYSQHSLLSTVNCIKTVIAAV---GQIFFA----RLSDIFG-RFSIMIVSIIFY--------- 146

  Fly   154 NSVGWLY------LGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVG 212
             |:|.:.      :.||.:|                          |..:||.||..||.:.|:.
Yeast   147 -SMGTIIESQAVNITRFAVG--------------------------GCFYQLGLTGIILILEVIA 184

  Fly   213 ALVSWKTLSLLCLIIPIL-LLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQ 276
            :..|.....||.|.||.| .::..:|          :|..:.|..| .|.||             
Yeast   185 SDFSNLNWRLLALFIPALPFIINTWI----------SGNVTSAIDA-NWKWG------------- 225

  Fly   277 NDLDQTGVDASVKDLFSNRASRNGMVISVLLMVF-----------QQFSGINAV---IFFMNEIF 327
                 .|:.|.:..|     :...:.|.:|.|.:           .:|..:|.:   .|.::..|
Yeast   226 -----IGMWAFILPL-----ACIPLGICMLHMRYLARKHAKDRLKPEFEALNKLKWKSFCIDIAF 280

  Fly   328 ESSSTLNPNVCTIVVGVVQVIMTLASSLLIE-KAGRKILLIFSSTIMTVCLAMLGAYNTINRHT- 390
            .....:...:.|:..|.|.|..|||..|..| |....|:......::.:.|.||.... .:||. 
Yeast   281 WKLDIIGMLLITVFFGCVLVPFTLAGGLKEEWKTAHIIVPEVIGWVVVLPLYMLWEIK-YSRHPL 344

  Fly   391 ---DLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTW 452
               ||.|..| :....::.|.::|:       |.|.|: :|..|..:||..|:.    ..:.:|.
Yeast   345 TPWDLIQDRG-IFFALLIAFFINFN-------WYMQGD-YMYTVLVVAVHESIK----SATRITS 396

  Fly   453 LFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQSWL 499
            |:.            |.|..:|....::.|.::.||......|..|:
Yeast   397 LYS------------FVSVIVGTILGFILIKVRRTKPFIIFGISCWI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 83/411 (20%)
MFS_1 96..443 CDD:284993 78/372 (21%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 90/437 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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