DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and ARN1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_011823.1 Gene:ARN1 / 856345 SGDID:S000001032 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:578 Identity:114/578 - (19%)
Similarity:196/578 - (33%) Gaps:221/578 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YDLLQENQS---------KTSKTRQYVAAMIICLGAVAAGTALS--------WTSPVFPQISAGN 77
            |:.|::|:|         .::..:.|:.| |:.|.|...|....        :|...   .|:.:
Yeast    47 YNALRQNRSLIIQQTEIIGSAYNKWYLQA-ILLLSAFICGYGYGLDGNIRYIYTGYA---TSSYS 107

  Fly    78 ESSFNSTTGGISNSTSNENDI---RLTDSQKTL-----------VGSML----------PFGALF 118
            |.|..||...|:...|..:.|   ||:|....|           ||:::          ..||:|
Yeast   108 EHSLLSTINVINAVVSAASQIIYARLSDVFGRLYLFISAVILYVVGTIIQSQAYDVQRYAAGAIF 172

  Fly   119 GALPSGYI----------ADRIGRRYTAMVMDI---PFIL-AWIT---LSFANS-VGWLY---LG 162
              ..:||:          :|....::..:...:   |||: .||.   .|.||. |.|.:   :.
Yeast   173 --YNAGYVGVILILLIILSDFSSLKWRLLYQFVPTWPFIINTWIAGNITSRANPVVNWSWDVGMW 235

  Fly   163 RFLIGIATGSFCVVAPMYI----------------------SEIAETSIRGSLGTLFQLLLTIGI 205
            .|:..::    ||  |:.:                      |...|......|..||.:|..:|:
Yeast   236 AFIFPLS----CV--PIVLCMLHMQWRARKTPEWHALKGQKSYYQEHGFIKILKQLFWMLDVVGV 294

  Fly   206 LFIYVVGALVSWKTLSLLCLIIPILL------------LVGLFIVPETPVYLLKNGKRSEANRAL 258
            |   ::|.       ||.|:::|:.|            |:|.|::....:.:|            
Yeast   295 L---LMGC-------SLGCILVPLTLAGGVKTTWNDSRLIGPFVLGFVLIPIL------------ 337

  Fly   259 KWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSG---INAVI 320
             |:| :|....:.|...:              |..:||..:.|.||.|:......:.   ...:|
Yeast   338 -WIW-EYRFARDPILPYR--------------LVKDRAVWSSMGISFLIDFIYYMAADYLYTVMI 386

  Fly   321 FFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNT 385
            ..:||..:|::.               |.||:|              |.||:.:...|:|     
Yeast   387 VAVNESVKSATR---------------IATLSS--------------FVSTVASPFFALL----- 417

  Fly   386 INRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMM-MGELFMPDVKGIAVSLSVMMNWVCVSL 449
            :.|.|.|..            ||:     :|...||: ||.|:  ..:|.:.|.|.::..:||  
Yeast   418 VTRCTRLKP------------FIM-----FGCALWMVAMGLLY--HFRGGSQSHSGIIGALCV-- 461

  Fly   450 VTWLFGVLNAGGADVPFWFFSAWMGVATAY------VAIALQETKGKSASQIQSWLSG 501
              |        |.....:.:...:.|.:|.      ...||..|..:..|.:.|.:||
Yeast   462 --W--------GVGTTLFTYPVTVSVQSAVSHENMATVTALNYTLYRIGSAVGSAVSG 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 89/474 (19%)
MFS_1 96..443 CDD:284993 83/429 (19%)
ARN1NP_011823.1 MFS_ARN_like 74..586 CDD:340880 109/551 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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