DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and ATR1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_013591.1 Gene:ATR1 / 854924 SGDID:S000004584 Length:542 Species:Saccharomyces cerevisiae


Alignment Length:546 Identity:93/546 - (17%)
Similarity:183/546 - (33%) Gaps:177/546 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NQSKTSKTRQYVAAMIICLGAVAAGTALSWTSPVFPQIS-------------------------- 74
            ||:.|::|...:..:....|  :.|.:.||....||.:|                          
Yeast    82 NQAGTTQTLSIMNILSDSFG--SEGNSKSWLMASFPLVSGSFILISGRLGDIYGLKKMLLVGYVL 144

  Fly    75 -------------AGNESSF---------------NSTTGGISN----STSNENDIRLTDSQKTL 107
                         :|:::.|               .:..|.|.|    .|..:|.:      .:.
Yeast   145 VIIWSLICGITKYSGSDTFFIISRAFQGLGIAFVLPNVLGIIGNIYVGGTFRKNIV------ISF 203

  Fly   108 VGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPF-ILAWITLSFANSVGWLYLGRFLIGIATG 171
            ||:|.|.||..|.|.:|.|.....:::       |: ..|:...:|.|.|..:|           
Yeast   204 VGAMAPIGATLGCLFAGLIGTEDPKQW-------PWAFYAYSIAAFINFVLSIY----------- 250

  Fly   172 SFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVSW-KTLSLLCLIIPILLLVGL 235
            :.....|..|...:...|...||.:..:||.    |::....:..| :...::.|||.::.|| :
Yeast   251 AIPSTIPTNIHHFSMDWIGSVLGVIGLILLN----FVWNQAPISGWNQAYIIVILIISVIFLV-V 310

  Fly   236 FIV--------PETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLF 292
            ||:        |..|..::|:....:...||.:.||.:                           
Yeast   311 FIIYEIRFAKTPLLPRAVIKDRHMIQIMLALFFGWGSF--------------------------- 348

  Fly   293 SNRASRNGMVISVLLMVFQ----QFSGINA-VIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLA 352
                    .:.:.....||    |::.:.| ..:||               .::.|::..::.  
Yeast   349 --------GIFTFYYFQFQLNIRQYTALWAGGTYFM---------------FLIWGIIAALLV-- 388

  Fly   353 SSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYG- 416
             ...|:.....:.|.||.....|...|  |..|....|.....:|       .:.|:||.:... 
Yeast   389 -GFTIKNVSPSVFLFFSMVAFNVGSIM--ASVTPVHETYFRTQLG-------TMIILSFGMDLSF 443

  Fly   417 PIPWMMMGELFMPDVKGIAVSL-SVMMNW---VCVSLVTWLFGVLNAGGADVPFWFFSA-WMGVA 476
            |...::..:....:.:|:|.|| :.::|:   :|:.:...:...:|:.|..:...:..| ::|:.
Yeast   444 PASSIIFSDNLPMEYQGMAGSLVNTVVNYSMSLCLGMGATVETQVNSDGKHLLKGYRGAQYLGIG 508

  Fly   477 TAYVAIALQETKGKSASQIQSWLSGR 502
            .|.:|..:     .....::|::.||
Yeast   509 LASLACMI-----SGLYMVESFIKGR 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 72/406 (18%)
MFS_1 96..443 CDD:284993 65/363 (18%)
ATR1NP_013591.1 MFS_Amf1_MDR_like 73..517 CDD:341029 90/532 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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