DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and AMF1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_015023.1 Gene:AMF1 / 854560 SGDID:S000005905 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:404 Identity:78/404 - (19%)
Similarity:151/404 - (37%) Gaps:116/404 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ALFGA-LPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFC---VV 176
            :|||| .|.|:.   :|..:::|:..    |||..        |.|   :::|||    |   .|
Yeast   175 SLFGASAPGGFF---LGAVFSSMLGQ----LAWWP--------WAY---WIMGIA----CFVLAV 217

  Fly   177 APMYISEIAETSIRGSLGTLFQLLL----------TIGIL---FIYVVGALVSWKTLSLLCLIIP 228
            |..::  |..|.:.....:.|:||.          .:|::   |.:..|.:|.|:|        |
Yeast   218 AGYFV--IPHTPMPSRDASSFKLLERIDFAGSVTGVVGLILFNFAWNQGPVVGWQT--------P 272

  Fly   229 ---ILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKD 290
               .||:||.|.:   .::.                   |..:..|...:.              
Yeast   273 YTYALLIVGTFFL---VIFA-------------------YIESRAAFPLLP-------------- 301

  Fly   291 LFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVVQV---IMTLA 352
             |:..:|....|:|.:...:..| ||  .||:..:..|.|....|.:.:.....|.:   ...:.
Yeast   302 -FAALSSDTAFVLSCIAAGWASF-GI--WIFYTWQFMEDSRGQTPLLSSAQFSPVAISGFCAAVT 362

  Fly   353 SSLLIEKAGRKILLIFSS---TIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVG 414
            :..|:.......:::|:.   |:.|:.:|....:.|....|.:|          |::......:.
Yeast   363 TGFLLSHTPPSTVMLFAMTAFTVGTILIATAPVHQTYWAQTFVS----------IIVMPWGMDMS 417

  Fly   415 YGPIPWMMMGELFMPDVKGIAVSL-SVMMNWVCVSLVTWLFGVL----NAGGADVPFWFFSAW-M 473
            : |...:|:.:....:.:|:|.|| :.::|: .:|:...:.|.:    |.|||.....:..:| |
Yeast   418 F-PAATIMLSDSMPHEHQGLAASLVNTVVNY-SISIGLGIAGTIESRVNDGGAKPLKGYRCSWYM 480

  Fly   474 GVATAYVAIALQET 487
            |:..:.:.|.:..|
Yeast   481 GIGLSGLGIFVAAT 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 76/397 (19%)
MFS_1 96..443 CDD:284993 66/353 (19%)
AMF1NP_015023.1 MFS_Amf1_MDR_like 48..493 CDD:341029 77/401 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.