DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and ITR2

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_014538.2 Gene:ITR2 / 854050 SGDID:S000005463 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:525 Identity:139/525 - (26%)
Similarity:230/525 - (43%) Gaps:86/525 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VSQEDGDSRNPITYDLLQENQSKTSKTRQYVAAMIICLGAVAAGTALSWTSPVFPQISAGNESSF 81
            |:.|| |:...||:     |||        ::..||.|..||:.:..                .|
Yeast    89 VNDED-DTSVIITF-----NQS--------ISPFIITLTFVASISGF----------------MF 123

  Fly    82 NSTTGGISN---STSNENDIR-LTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIP 142
            ...||.||:   |.:.:.|.: ||..:|.|:.:....|||..::.:|..||..|||...|..::.
Yeast   124 GYDTGYISSALISINRDLDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLM 188

  Fly   143 FILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILF 207
            |::..|....|:....:..||.::|...|...:::|::|||||...|||.|..:..|.||.|.|.
Yeast   189 FLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLI 253

  Fly   208 IYVVGALVS-----WKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCN 267
            .|..||.::     |:.|..|.||..:|.......:|:||.|.:..|....|...||   ..|.|
Yeast   254 AYGCGAGLNHVKNGWRILVGLSLIPTVLQFSFFCFLPDTPRYYVMKGDLKRAKMVLK---RSYVN 315

  Fly   268 TSNAIQAIQNDLDQTGVDAS------------------VKDLFSNRASRNGMVISVLLMVFQQFS 314
            |.:.|      :||...:.|                  ||:|.:..::...::|...|...|||:
Yeast   316 TEDEI------IDQKVEELSSLNQSIPGKNPITKFWNMVKELHTVPSNFRALIIGCGLQAIQQFT 374

  Fly   315 GINAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAM 379
            |.|::::|...|||:....|.:..:|:|.....:.||.:...|:|.||:.:|:.....|||.|.:
Yeast   375 GWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVI 439

  Fly   380 -------LG-AYNTINR--HTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGI 434
                   || .:|..:.  .:|...|.|.:.::.|:::...:::|.|.:|| ...|||..:|:|:
Yeast   440 CAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFIIVYAAFYALGIGTVPW-QQSELFPQNVRGV 503

  Fly   435 AVSLSVMMNW-----VCVSLVTWLFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQ 494
            ..|.:...||     :..:.:|.|..:...|    .|.||:....::|.:......|..|....:
Yeast   504 GTSYATATNWAGSLVIASTFLTMLQNITPTG----TFSFFAGVACLSTIFCYFCYPELSGLELEE 564

  Fly   495 IQSWL 499
            :|:.|
Yeast   565 VQTIL 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 115/424 (27%)
MFS_1 96..443 CDD:284993 106/380 (28%)
ITR2NP_014538.2 MFS_HMIT_like 115..556 CDD:340918 123/470 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9181
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X729
TreeFam 00.000 Not matched by this tool.
43.810

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