DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and VBA5

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_013031.3 Gene:VBA5 / 853980 SGDID:S000001813 Length:582 Species:Saccharomyces cerevisiae


Alignment Length:503 Identity:101/503 - (20%)
Similarity:175/503 - (34%) Gaps:157/503 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IICLGAVAAGTALSWTSPVFPQISAGNESSFNSTTGGISNSTSNENDI---------RLTDSQKT 106
            |..|..:..||.:...:..|     ||.|.    ||.:....|..|.|         .:...|.:
Yeast    49 ITALDILIVGTIIDVVAEQF-----GNYSK----TGWLVTGYSLPNAILSLIWGRFASIIGFQHS 104

  Fly   107 LVGSMLPF--GALFGALPS-------GYI-----------------ADRIGRRYTAMVMDI---P 142
            |:.::|.|  |:|..||.|       |.:                 ...:|.|...:|:.|   .
Yeast   105 LILAILIFEAGSLIAALASSMNMLIFGRVVAGVGGSGLQTLCFVIGCTMVGERSRPLVISILSCA 169

  Fly   143 FILAWIT-----LSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAET-----SIRGSLGTL- 196
            |.:|.|.     .:|...|.|.:.  |.|.:..|...::. ..::..||.     .|:.::||: 
Yeast   170 FAVAAIVGPIIGGAFTTHVTWRWC--FYINLPIGGLAIIM-FLLTYKAENKGILQQIKDAIGTIS 231

  Fly   197 ------------FQLLLTIGILF---------------IYVVGAL-----VSWKTLSLLCLIIPI 229
                        |:.|:. ||:|               ::::|..     .||.:..::..::  
Yeast   232 SFTFSKFRHQVNFKRLMN-GIIFKFDFFGFALCSAGLVLFLLGLTFGGNKYSWNSGQVITYLV-- 293

  Fly   230 LLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLFSN 294
             |.|.|||......:.|.:....|.:                             :.|.:.|...
Yeast   294 -LGVLLFIFSLVYDFFLFDKFNPEPD-----------------------------NISYRPLLLR 328

  Fly   295 RASRNGMVISVLLMVFQQFSGINAVIFFMNEIFE---SSSTLNPNVCTIVVGVVQVIMTLASSLL 356
            |......:|.|.::.|...:|.|..:.:..:.|:   :||.....:..|.:.:..||..:||.::
Yeast   329 RLVAKPAIIIVNMVTFLLCTGYNGQMIYSVQFFQLIFASSAWKAGLHLIPIVITNVIAAIASGVI 393

  Fly   357 IEKAGR-KILLIFSSTIMTVCLAMLGA------YNTINRHTDLSQSIGWLPLLCIVLFIVSFSVG 414
            .:|.|. |.||||...     |.::||      .||..:.|.:.           ||.:..||:|
Yeast   394 TKKLGLVKPLLIFGGV-----LGVIGAGLMTLMTNTSTKSTQIG-----------VLLLPGFSLG 442

  Fly   415 YGPIPWMMMGELFM----PDVKGIAVSLSVMMNWVCVSLVTWLFGVLN 458
            :.....:|..:|.:    |:.....:.::. .|....||.|.|.|||:
Yeast   443 FALQASLMSAQLQITKDRPEAAMDFIEVTA-FNTFMKSLGTTLGGVLS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 90/458 (20%)
MFS_1 96..443 CDD:284993 82/441 (19%)
VBA5NP_013031.3 MFS_Azr1_MDR_like 43..493 CDD:341045 101/503 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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