DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and MPH3

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_012694.1 Gene:MPH3 / 853625 SGDID:S000003921 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:538 Identity:125/538 - (23%)
Similarity:211/538 - (39%) Gaps:85/538 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSEKVVRAMARWWQTVSQEDGDSRN-PITYDLLQENQSKTSKTRQYVAAMIICLGAVAAGTALSW 65
            ||.||:..:....:...:.|...|. |:...|  ....|.:.....|:..:|..|...|.....:
Yeast    60 DSNKVITEIFDATEDAKEADESERGMPLATAL--NTYPKAAAWSLLVSTTLIMEGYDTAILGAFY 122

  Fly    66 TSPVFPQISAGNESSFNSTTGGISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRI 130
            ..|:| |...|::   |..||....|.|.:..:.|......:||..|          :|...|.:
Yeast   123 ALPIF-QRKFGSQ---NDKTGEWEISASWQIGLTLCYMAGEIVGLQL----------TGPSVDLV 173

  Fly   131 GRRYTAMVMDIPFILAWIT--LSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSL 193
            |.|||.::  ..|.||..|  |.|.||:|.:.:|:.|.|:..|.|..:...|.|||...::|..|
Yeast   174 GNRYTLII--ALFFLAAFTFILYFCNSLGMIAVGQALCGMPWGCFQCLTVSYASEICPLALRYYL 236

  Fly   194 GTLFQLLLTIGILFIYVVGAL-----------VSWKTLSLLCLIIPILLLVGLFIVPETPVYLLK 247
            .|...|....|.||  ..|.:           :.:|....|..|:|:.|.:|:|..||:|.:|:|
Yeast   237 TTYSNLCWLFGQLF--AAGIMKNSQKKYADSELGYKLPFALQWILPVPLALGIFFAPESPWWLVK 299

  Fly   248 NGKRSEANRALKWLWGDYCNTSNAIQAIQND-----LDQ----TGVDASVKDLFSNRASRNGMVI 303
            .|:..||.|:|:............:..::.|     :|:    |..:.|..|.|.::.:|....|
Yeast   300 KGRFDEARRSLRRTLSGKGPEKEILVTLEVDKIKVTIDKEKRLTSKEGSYSDCFEDKINRRRTRI 364

  Fly   304 SVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKA----GRKI 364
            :.|....|...| :.:|.:....:|.:..  ....:....::|..:.:.::.|...|    ||..
Yeast   365 TCLCWAGQATCG-SILIGYSTYFYEKAGV--STEMSFTFSIIQYCLGICATFLSWWASKYFGRYD 426

  Fly   365 LLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMP 429
            |..|.....|:...::|.....:.|   ...:|...||..|.|.  :::|..|:.:.::.|  ||
Yeast   427 LYAFGLAFQTIVFFIIGGLGCSSTH---GSKMGSGSLLMAVAFF--YNLGIAPVVFCLVSE--MP 484

  Fly   430 D----VKGIAVSLSV--MMNWVCVSLV-------TWLFGVLNAGGADVPFWFFSAWMGV----AT 477
            .    .|.|.::.:.  :::.:|..|:       .|     |.|.....||      ||    ..
Yeast   485 SSRLRTKTIILARNTYNVVSIICSVLILYQLNSKKW-----NWGAKSGFFW------GVLCFCTL 538

  Fly   478 AYVAIALQETKGKSASQI 495
            .:..:.|.||.||:..:|
Yeast   539 IWAVVDLPETAGKTFVEI 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 97/428 (23%)
MFS_1 96..443 CDD:284993 88/378 (23%)
MPH3NP_012694.1 SP 72..556 CDD:273317 120/524 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342805
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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