DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and VPS73

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_011411.3 Gene:VPS73 / 852774 SGDID:S000003072 Length:486 Species:Saccharomyces cerevisiae


Alignment Length:493 Identity:122/493 - (24%)
Similarity:230/493 - (46%) Gaps:65/493 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QENQSKTSKTRQYVAAMIICLGAVAAGTALSWTSPVFPQISAGNE----SSFNSTTGGIS----- 89
            ::|:.|.:|...| |.::..:|::..|..||       :::|..:    |.|:....|..     
Yeast    18 RQNKHKITKALCY-AIIVASIGSIQFGYHLS-------ELNAPQQVLSCSEFDIPMEGYPYDRTW 74

  Fly    90 -NSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFA 153
             .....:..|.|.|.|..:|.|:...|.:.|:..:..:|:..||::::::.....|:..:.:..:
Yeast    75 LGKRGYKQCIPLNDEQIGIVTSVFCIGGILGSYFATSLANIYGRKFSSLINCTLNIVGSLIIFNS 139

  Fly   154 NSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVS-- 216
            ||...|.:||.|:||:.||..|:.|::|.|:|.:...|.||::.|:.:.:|:|....:...::  
Yeast   140 NSYRGLIIGRILVGISCGSLIVIIPLFIKEVAPSGWEGLLGSMTQICIRLGVLLTQGIALPLTDS 204

  Fly   217 --WKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQN-D 278
              |:.:.....:|.:|.....|||.|:|.:||.:|:.::|..:|..|.|  .....|.|.||: .
Yeast   205 YRWRWILFGSFLIAVLNFFMWFIVDESPKWLLAHGRVTDAKLSLCKLRG--VTFDEAAQEIQDWQ 267

  Fly   279 LDQTGVDASVKDLFSNRAS---------------RNGMVISVLLMVFQQFSGINAVIFFMNEIFE 328
            |.....|..::...:|..|               ::..||:|||. .|||.|||:::.:..:|. 
Yeast   268 LQIESGDPLIEPTTTNSISGSNSLWKYLRDRTNVKSRHVITVLLF-GQQFCGINSIVLYGTKII- 330

  Fly   329 SSSTLNPNVC---TIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGA---YNTIN 387
              |.|.|...   ...:.:|.|::|:..||||....||.||:.|:.:::|...::|.   :|.:|
Yeast   331 --SQLYPQHAIRINFFISMVNVLVTILVSLLIHSLPRKPLLMTSTVLVSVTAFIMGIAMNHNKMN 393

  Fly   388 RHTDLSQSIGWLPLLCIVLFIVS--FSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLV 450
                         ||.:..||..  |::|..|:|:::|.|:..|....:|.....:.|||...::
Yeast   394 -------------LLIVFSFIYMGVFTMGLNPLPFIIMREVSKPQDMVLAQRYGTICNWVGTFII 445

  Fly   451 TWLFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETK 488
            .:.|.:::...:...|..|:......:|::...:.|||
Yeast   446 AYTFPIIHDVLSGYVFIIFAIIACSISAFIWKKVPETK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 106/413 (26%)
MFS_1 96..443 CDD:284993 99/374 (26%)
VPS73NP_011411.3 MFS_GLUT_Class1_2_like 31..484 CDD:340915 118/479 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 174 1.000 Inparanoid score I987
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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