DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and VBA2

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_009852.3 Gene:VBA2 / 852596 SGDID:S000000497 Length:474 Species:Saccharomyces cerevisiae


Alignment Length:493 Identity:95/493 - (19%)
Similarity:165/493 - (33%) Gaps:180/493 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 TTGGISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWI 148
            ||..:..|||                    |..|:|:     .:|.:|||......:..|.:..:
Yeast     8 TTAYLITSTS--------------------FQPLYGS-----FSDALGRRNCLFFANGAFTIGCL 47

  Fly   149 TLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGIL----FIY 209
            ...|:.::..|...|.|.||..|....::.:..|::..:|.||.......|||..|.:    |..
Yeast    48 ACGFSKNIYMLSFMRALTGIGGGGLITLSTIVNSDVIPSSKRGIFQAFQNLLLGFGAICGASFGG 112

  Fly   210 VVGALVSWKTLSLLCLII--PILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAI 272
            .:.:.:.|:    .|.:|  ||.::..:.:     .|.:.|.|  |.||          ..|:..
Yeast   113 TIASSIGWR----WCFLIQVPISVISSILM-----NYYVPNQK--EYNR----------QNSSIF 156

  Fly   273 Q---AIQNDLDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESS--ST 332
            |   .|..|:|..|                    |:|::     :|:...:.:::....:|  |.
Yeast   157 QNPGKILRDIDVMG--------------------SILII-----TGLTLQLLYLSLGCSTSKLSW 196

  Fly   333 LNPNVCTIVVGVVQVIMTLASSLLIEK--AGRKIL---LIFSSTIMTVCLAMLGAYNTINRHTDL 392
            .:|:|..::||.|.:::..   :|.|:  :.|.|:   |:.||            |:        
Yeast   197 TSPSVLLLLVGSVIILLLF---ILHERKTSARAIIPMELVNSS------------YS-------- 238

  Fly   393 SQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKG------------------------ 433
                       :|:..:|..||:....::....||...|.|                        
Yeast   239 -----------VVVLSISILVGFASYAYLFTLPLFFQIVLGDSTAKAGLRLTIPSLFTPVGSLIT 292

  Fly   434 ---------------IAVSLSVMMNWVCVSL----VTWLFGVL----NAG-GADVP-----FWFF 469
                           |.:||..:.|::.:.:    ..||.|:.    |.| |...|     |.|.
Yeast   293 GFSMSKYNCLRLLLYIGISLMFLGNFLFLFIEKTSPNWLIGLFLIPANLGQGITFPTTLFTFIFM 357

  Fly   470 SAWMGVATAYVAIALQETKGK------SASQIQSWLSG 501
            .:....|||...:.|..:.|.      ||..||...:|
Yeast   358 FSKSDQATATSTLYLFRSIGSVWGVAISAGVIQLSFAG 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 83/454 (18%)
MFS_1 96..443 CDD:284993 70/401 (17%)
VBA2NP_009852.3 MFS 1..384 CDD:421695 90/480 (19%)
TRI12 <107..>249 CDD:115279 38/221 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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