DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and CIN10

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_010675.3 Gene:CIN10 / 851995 SGDID:S000002795 Length:555 Species:Saccharomyces cerevisiae


Alignment Length:579 Identity:142/579 - (24%)
Similarity:245/579 - (42%) Gaps:131/579 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSEKVVRAMARWWQTVSQEDGDSRNPITYDLLQENQSKTSKTRQYVAAMIICLGAVAAGTALSWT 66
            :||.|...:   :..:||...::.|    |:.|...:.|.||      .:|.:||...|....:.
Yeast     5 ESEDVYSDL---YSIISQVTSNTAN----DIEQLPYALTFKT------SLIFVGATIGGLLFGYD 56

  Fly    67 SPVFPQISAGNESSFNSTTGGISNSTSNE--NDIRLTDSQKTLVGSMLPFGALFGALPSGYIADR 129
            :.|.               .|:..|...|  :.:.|||.||.|:.|....|:.||::.:..:|||
Yeast    57 TGVI---------------SGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADR 106

  Fly   130 IGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLG 194
            .|||.|..:....||||.|.::.|.::.:|..||.|:|||.|......|:::|||:.:.|||.:.
Yeast   107 YGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFML 171

  Fly   195 TLFQLLLTIGILFIYVVGALV-----SWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEA 254
            ||..:.:|.|.|..||:.:|:     ||:.|..|..|..||.|..|..:||:|.:.:..|.....
Yeast   172 TLNIIAITGGQLVSYVIASLMKEIDNSWRYLFALSAIPAILFLSILDFIPESPRWSISKGDILYT 236

  Fly   255 NRALKWLW--GDYCNTSNAIQAIQNDLDQTGV--DAS--------------------------VK 289
            ..:|:.|:  ....:.::.|:.:..:||:..:  |||                          :|
Yeast   237 RDSLRMLYPTASTYHVNSKIKQLIIELDKLRLYEDASEPLLVQSQSVIRYMDSSTSGTLSPPNIK 301

  Fly   290 DLFSN--RASR-----------------NG-------------------MVISVLLMVFQQFSGI 316
            .|.||  |.|.                 ||                   :::..:||.|||.:|.
Yeast   302 RLSSNTERTSNTMSSSSAYLSALRGPAPNGALASNKKKRHRMEPRTIRALIVGCMLMFFQQITGF 366

  Fly   317 NAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLG 381
            ||.:::...||...:..||.:..|::.....|.|..:...::..||:.:|:.:..||||.|.:..
Yeast   367 NAFMYYAAIIFSKFNIKNPLLPPILIASTNFIFTFFAMYTMDSLGRRAILLRTILIMTVGLLLCS 431

  Fly   382 ---AYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMP-DVKGIAVSLSVMM 442
               .::.:|           |.|:.:|:::.:::...|.:||..:.  |:| :.:....|.....
Yeast   432 VGFGHDQVN-----------LLLISVVIYVAAYASAMGSVPWTCVE--FLPLNRRSFGASCIACT 483

  Fly   443 NWVCVSLVTWLF-GVLNAGGAD---VPFWFFS--AWMGVATAYVAIALQETKGKSASQI 495
            ||:..:.|:..: ..:|..|.:   :.|.||:  ||.     :|.....|.||.|..::
Yeast   484 NWLTNAFVSMTYLSTINTIGDENTMLIFAFFTVCAWF-----FVYFWYPEVKGLSLEEV 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 119/468 (25%)
MFS_1 96..443 CDD:284993 108/423 (26%)
CIN10NP_010675.3 MFS_HMIT_like 45..528 CDD:340918 126/515 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13428
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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