DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and VBA4

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_010404.1 Gene:VBA4 / 851697 SGDID:S000002526 Length:768 Species:Saccharomyces cerevisiae


Alignment Length:512 Identity:91/512 - (17%)
Similarity:179/512 - (34%) Gaps:169/512 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ENQSKTSKTRQYVAAMIICLGAVAAGTALSWTSPVFP----QISAGNESSFNSTTGGISN----- 90
            :||:.:||:...||                 .||..|    :|::....|...:.|.:.|     
Yeast   184 DNQTSSSKSLHIVA-----------------PSPEVPVSGDEITSYGYGSIPQSIGDVENGLNPP 231

  Fly    91 ---STSNE---NDIRLTDSQKTLVGSMLPFGALFGALPSG---YIADRIGRRYTAM--------- 137
               :||::   :|:    :::.:..|.:.....|.|:.|.   .||.:|...:..:         
Yeast   232 YVENTSSDELVHDL----TRRRIFSSCMCTYLFFIAMDSSIILVIASKIASEFHELWRLSLVISA 292

  Fly   138 --------------------------VMDIPFILAWITLSFANSVGWLYL-GRFLIGIATGSFCV 175
                                      :....|||... ||::::..|.:: .|.:.|...||...
Yeast   293 YLLSNAIGQLVFLKLSLISSVKLLLCIAQFSFILGGY-LSWSSAHFWTFIFARCVTGFGGGSLIA 356

  Fly   176 VAPMYISEIAET-----SIRGSLGTLFQLLLTIG----ILFIYVVGALVSWKTLSLL----CLII 227
            :....::..::.     |:..|:.| |.:.:.||    .||....|:  .|:...|:    ||:.
Yeast   357 LKSTIMNRFSQKNDSRYSLSASMIT-FAMGVVIGPFMMNLFDSSHGS--GWRNAFLIPVPFCLVN 418

  Fly   228 PILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQ--------------ND 278
            ..::|..::.|..| :|          .|....||..:.||..:....:              ..
Yeast   419 ASIMLADMYSVKST-LY----------GRPTPTLWKRFKNTLLSPDLYEILTLTLFLLCFVQVTS 472

  Fly   279 LDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSST-LNPNVCTIVV 342
            ||.||:        .|......::.||::        :..::||   :.|:|.| :|..:...:.
Yeast   473 LDLTGL--------KNNTMIQALLFSVII--------VCGILFF---LIETSDTYMNSVISMSLQ 518

  Fly   343 GVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLF 407
            |..::|.|:. .:....|....::.|.:|...:.|.:    :|:.....||.            |
Yeast   519 GDKRLIWTMI-GISFCFAALMCIIPFGTTYFIIVLNL----STLQLAERLSP------------F 566

  Fly   408 IVSFSVGYGPIP--WMMMGELFM-------------PDVKGIAVSLSVMMNWVCVSL 449
            ..|..:||..:.  |...|:.|:             ..:.|::::|.|...::|:||
Yeast   567 FFSIVLGYFSVSYFWKSKGQNFLLKFVLSGATLLLYVALMGVSLNLPVWKQYICLSL 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 76/436 (17%)
MFS_1 96..443 CDD:284993 73/428 (17%)
VBA4NP_010404.1 MFS 259..>414 CDD:421695 27/158 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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