DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and VBA3

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:389 Identity:77/389 - (19%)
Similarity:141/389 - (36%) Gaps:113/389 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 IGRRYTAMVMDI---PFILAWIT-----LSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAE 186
            :|.|...:|:.|   .|.:|.|.     .:|...|.|.:.  |.|.:..|...::. ..::..||
Yeast    30 VGERSRPLVISILSCAFAVAAIVGPIIGGAFTTHVTWRWC--FYINLPIGGLAIIM-FLLTYKAE 91

  Fly   187 T-----SIRGSLGTL-------------FQLLLTIGILF---------------IYVVGAL---- 214
            .     .|:.::||:             |:.|:. ||:|               ::::|..    
Yeast    92 NKGILQQIKDAIGTISSFTFSKFRHQVNFKRLMN-GIIFKFDFFGFALCSAGLVLFLLGLTFGGN 155

  Fly   215 -VSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQND 278
             .||.:..::..::   |.|.|||......:.|.:....|.:                       
Yeast   156 KYSWNSGQVIAYLV---LGVLLFIFSLVYDFFLFDKFNPEPD----------------------- 194

  Fly   279 LDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFE---SSSTLNPNVCTI 340
                  :.|.:.|...|......:|.:.::.|...:|.|..:.:..:.|:   :||.....:..|
Yeast   195 ------NISYRPLLLRRLVAKPAIIIINMVTFLLCTGYNGQMIYSVQFFQLIFASSAWKAGLHLI 253

  Fly   341 VVGVVQVIMTLASSLLIEKAGR-KILLIFSSTIMTVCLAMLGA------YNTINRHTDLSQSIGW 398
            .:.:..||..:||.::.:|.|. |.||||...     |.::||      .||..:.|.:.     
Yeast   254 PIVITNVIAAIASGVITKKLGLVKPLLIFGGV-----LGVIGAGLMTLMTNTSTKSTQIG----- 308

  Fly   399 LPLLCIVLFIVSFSVGYGPIPWMMMGELFM----PDVKGIAVSLSVMMNWVCVSLVTWLFGVLN 458
                  ||.:..||:|:.....:|..:|.:    |:.....:.::. .|....||.|.|.|||:
Yeast   309 ------VLLLPGFSLGFALQASLMSAQLQITKDRPEAAMDFIEVTA-FNTFMKSLGTTLGGVLS 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 77/389 (20%)
MFS_1 96..443 CDD:284993 69/372 (19%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 77/389 (20%)
MFS <1..>181 CDD:421695 31/157 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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