DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and GEX1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_009863.2 Gene:GEX1 / 850289 SGDID:S000000575 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:402 Identity:69/402 - (17%)
Similarity:135/402 - (33%) Gaps:151/402 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NPITYDL------LQENQSKTSK--TRQYVAAMIICLGAVAAGTALSWTSPVFPQISAGNESSFN 82
            |..||.:      |:||:..:::  :.:|...:|........|.:|.:|              ..
Yeast    30 NDDTYSMTSTFFKLKENEIMSAQFDSLKYKILLISTAFVCGFGISLDYT--------------LR 80

  Fly    83 STTGGISNSTSNENDIRLT---DSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFI 144
            ||..|.:.::.:|:.:..|   .:....|||.:.:..|         :|..||....:|..|.:|
Yeast    81 STYTGYATNSYSEHSLLSTVQVINAVVSVGSQVVYSRL---------SDHFGRLRLFLVATIFYI 136

  Fly   145 LAWITLSFANSVGWLYLGRFLIGIATGSF---CVVAPMYISEIAETSIRGSLGTLFQLLLTI--- 203
            :..|..|.|..         |...|.||.   |                |.:||  .||||:   
Yeast   137 MGTIIQSQATR---------LTMYAAGSVFYNC----------------GYVGT--NLLLTLILS 174

  Fly   204 ------------------GILFIYVVGALV---------SWKTLSLLCLIIPILLLVGLFIVPET 241
                              .|:..::.|.::         || .:::...|.|:..|..:|::   
Yeast   175 DFSSLKWRMFYQYASYWPYIIIPWISGNIITAANPQKNWSW-NIAMWAFIYPLSALPIIFLI--- 235

  Fly   242 PVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLFSNRASRNGMVISVL 306
             :|:     :.::::..:|                         .|:|:  ..|..|.|.:...|
Yeast   236 -LYM-----KYKSSKTAEW-------------------------RSLKE--QARKERTGGLFENL 267

  Fly   307 LMVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSST 371
            :.:|.:...:..::.                 |:.:|.:.|.:|||:....:....||:   ::.
Yeast   268 VFLFWKLDIVGILLI-----------------TVSLGCILVPLTLANETSQKWHNSKII---ATL 312

  Fly   372 IMTVCLAMLGAY 383
            :...||..:..|
Yeast   313 VSGGCLFFIFLY 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 54/324 (17%)
MFS_1 96..443 CDD:284993 54/324 (17%)
GEX1NP_009863.2 MFS_ARN_like 59..571 CDD:340880 62/373 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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