DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and SGB1

DIOPT Version :10

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_178100.3 Gene:SGB1 / 844321 AraportID:AT1G79820 Length:495 Species:Arabidopsis thaliana


Alignment Length:506 Identity:145/506 - (28%)
Similarity:241/506 - (47%) Gaps:63/506 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TYDLLQ-ENQSKTSKTRQYVAAMIICLGAVAAGTAL-------SWTSPVFPQISAGNESSFNSTT 85
            ||.::: .:..|...::::::|:.....||...|..       ||...:...:.|...|......
plant     7 TYTIMRGRHIDKRVPSKEFLSALDKAETAVRLPTGTGKDCGNPSWKRSLPHVLVASLTSLLFGYH 71

  Fly    86 GGISNSTSNENDIRLTDSQKT----LVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFIL- 145
            .|:.|.|.....|.|..|..|    ||.|....||..|:|.||.:||.:|||....:..:|.|: 
plant    72 LGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSALPMIVG 136

  Fly   146 AWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYV 210
            |.::.|..:.:|.| |||||:||..|....|..:|::|::...:||:.|:..|:...||:|    
plant   137 ASVSASTESLMGML-LGRFLVGIGMGIGPSVTALYVTEVSPAYVRGTYGSSTQIATCIGLL---- 196

  Fly   211 VGALVS----------WKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRAL-KWLWGD 264
             |:|.:          |:....:..:...:|.|.:.:..|:|.:|.|.|:.:||.... |.|.|.
plant   197 -GSLFAGIPAKDNLGWWRICFWISTVPAAMLAVFMELCVESPQWLFKRGRAAEAEAVFEKLLGGS 260

  Fly   265 YCNTSNAIQAIQNDLDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFES 329
            |...:.| :.:::|.......|.:.:|...|:.| .:.|...|...||.||||||.:|.:.:|:.
plant   261 YVKAAMA-ELVKSDRGDDADSAKLSELLFGRSFR-VVFIGSTLFALQQLSGINAVFYFSSTVFKK 323

  Fly   330 SS--TLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLG-AYNTINRHTD 391
            :.  :.:.|:|   |||..::.:..:.:|::|.|||:|||.|...|.|.|.:.. ||      |.
plant   324 AGVPSASANIC---VGVCNLLGSTVAVVLMDKLGRKVLLIGSFAGMAVSLGLQAIAY------TS 379

  Fly   392 LSQSIGWLPLLC--IVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLF 454
            |....|.|.|..  ::||::||:.|.||:|.:::.|:....::..|:::.:.::||....|..||
plant   380 LPSPFGTLFLSVGGMLLFVLSFATGAGPVPSLLLSEICPGRLRATALAVCLAVHWVINFFVGLLF 444

  Fly   455 ---------GVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQ 496
                     .:|||     .|.||..   ||..:|...:.||||||..:|:
plant   445 LRMLEQLGSVLLNA-----IFGFFCV---VAVIFVQKNVVETKGKSLQEIE 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS_GLUT6_8_Class3_like 46..494 CDD:340916 141/484 (29%)
SGB1NP_178100.3 MFS_GLUT_like 60..477 CDD:340873 129/441 (29%)

Return to query results.
Submit another query.