DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and STP9

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_175449.1 Gene:STP9 / 841453 AraportID:AT1G50310 Length:517 Species:Arabidopsis thaliana


Alignment Length:496 Identity:116/496 - (23%)
Similarity:215/496 - (43%) Gaps:91/496 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VAAMIICLGAVAAGTALSW--------------TSPVFPQI-----SAGNESSFNSTTGGISNST 92
            |..::.|:.|...|....:              .|..||::     .|..|:::           
plant    23 VFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEARRETAY----------- 76

  Fly    93 SNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVG 157
                 .:..:....|..|.|...||..:..:..:..:.||:.:..|..:.|::..:..:||.:|.
plant    77 -----CKFDNQLLQLFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVA 136

  Fly   158 WLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVG------ALVS 216
            .|.:||.|:|:..|......|:|:||:|...|||:|...||:.:|||||...::.      |...
plant   137 MLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLINYGTSQMAKNG 201

  Fly   217 WKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWG---------DYCNTSNAI 272
            |:....|..:..:::::|.|::|:||..:|:.||..:|...|:.:.|         |.|:...|.
plant   202 WRVSLGLAAVPAVIMVIGSFVLPDTPNSMLERGKYEQAREMLQKIRGADNVDEEFQDLCDACEAA 266

  Fly   273 QAIQNDLDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFES-----SST 332
            :.:.|..         |::|.....|..:|....:..|||.:|||.::|:...:|::     .::
plant   267 KKVDNPW---------KNIFQQAKYRPALVFCSAIPFFQQITGINVIMFYAPVLFKTLGFADDAS 322

  Fly   333 LNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGA-----YNTINRHTDL 392
            |   :..::.|.|.|:.||.|...:::.||:||.:.....|.|...::|.     :.|....|..
plant   323 L---ISAVITGAVNVVSTLVSIYAVDRYGRRILFLEGGIQMIVSQIVVGTLIGMKFGTTGSGTLT 384

  Fly   393 SQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVK--GIAVSLSVMM-------NWVCVS 448
            ..:..|: |..|.|::..|:..:||:.|::..|:...:::  |.|:::||.|       .:....
plant   385 PATADWI-LAFICLYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTM 448

  Fly   449 LVTWLFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETKG 489
            |....||:         |:||...:.|.|.::...|.||||
plant   449 LCHMKFGL---------FYFFGGMVAVMTVFIYFLLPETKG 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 102/419 (24%)
MFS_1 96..443 CDD:284993 94/380 (25%)
STP9NP_175449.1 MFS_STP 31..477 CDD:340919 110/483 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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