DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and STP1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_172592.1 Gene:STP1 / 837667 AraportID:AT1G11260 Length:522 Species:Arabidopsis thaliana


Alignment Length:430 Identity:118/430 - (27%)
Similarity:204/430 - (47%) Gaps:56/430 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 TLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIAT 170
            |:..|.|...||..:|.:..:..:.|||.:.:...|.|....:...||..|..|.:||.|:|...
plant    83 TMFTSSLYLAALISSLVASTVTRKFGRRLSMLFGGILFCAGALINGFAKHVWMLIVGRILLGFGI 147

  Fly   171 GSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVS-------WKTLSLLCLIIP 228
            |......|:|:||:|....||:|...|||.:|||||...|:....:       |: |||...::|
plant   148 GFANQAVPLYLSEMAPYKYRGALNIGFQLSITIGILVAEVLNYFFAKIKGGWGWR-LSLGGAVVP 211

  Fly   229 ILLL-VGLFIVPETPVYLLKNGKRSEANRALKWLWG---------DYCNTSNAIQAIQNDLDQTG 283
            .|:: :|..::|:||..:::.|:..||...|:.:.|         |....|...|:|::..    
plant   212 ALIITIGSLVLPDTPNSMIERGQHEEAKTKLRRIRGVDDVSQEFDDLVAASKESQSIEHPW---- 272

  Fly   284 VDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFF----MNEI-FESSSTLNPNVCTIVVG 343
                 ::|. .|..|..:.::|::..|||.:|||.::|:    .|.| |.:.::|   :..:|.|
plant   273 -----RNLL-RRKYRPHLTMAVMIPFFQQLTGINVIMFYAPVLFNTIGFTTDASL---MSAVVTG 328

  Fly   344 VVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLP-------- 400
            .|.|..||.|...:::.||:.|.:...|.|.:|.|::.|  .|.....:..:.|.||        
plant   329 SVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAA--CIGAKFGVDGTPGELPKWYAIVVV 391

  Fly   401 -LLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNAG---G 461
             .:||  ::..|:..:||:.|::..|:|..:::..|.|::|.:|.:...::..:|..:...   |
plant   392 TFICI--YVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLTMLCHLKFG 454

  Fly   462 ADVPFWFFSAWMGVATAYVAIALQETKGKSASQI-QSWLS 500
            ..:.|.||...|.:   :|.|.|.||||....:: |.|.|
plant   455 LFLVFAFFVVVMSI---FVYIFLPETKGIPIEEMGQVWRS 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 109/409 (27%)
MFS_1 96..443 CDD:284993 101/367 (28%)
STP1NP_172592.1 MFS_STP 29..476 CDD:340919 111/413 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

Return to query results.
Submit another query.