DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and AT5G59250

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_200733.2 Gene:AT5G59250 / 836043 AraportID:AT5G59250 Length:558 Species:Arabidopsis thaliana


Alignment Length:541 Identity:137/541 - (25%)
Similarity:244/541 - (45%) Gaps:88/541 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SRNPITYDLLQENQSKTSK----TRQYVAAMIICLGAVAAG-----------------TALSWTS 67
            ||...:|..|:|.....||    |.:|  ..|..:||...|                 .:.||:|
plant    35 SRPDSSYLSLKERTCFVSKPGLVTTRY--RHIFQVGAETGGEFADSGEVADSLASDAPESFSWSS 97

  Fly    68 PVFPQI-SAGNESSFNSTTGGISNST--------SNENDIRLTDSQKTLVGSMLPFGALFGALPS 123
            .:.|.| .|.....|....|..|.:|        |.......:..|..||.|...:|||.|::..
plant    98 VILPFIFPALGGLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSLYGALLGSISV 162

  Fly   124 GYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETS 188
            ..:||.:|||...::..:.::|..:....|..:..|.:||.|.|...|.....||:||:|...:.
plant   163 YGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQ 227

  Fly   189 IRGSLGTLFQLLLTIGILFIYVVGA-----LVSWKTLSLLCLIIPILLLVGLFIVPETPVYLL-- 246
            |||:|.:|.:|.:.:|||..:.||:     :..|:.:......:.:|:.:|::.:|.:|.:||  
plant   228 IRGTLISLKELFIVLGILLGFSVGSFQIDVVGGWRYMYGFGTPVALLMGLGMWSLPASPRWLLLR 292

  Fly   247 -KNGK------RSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVD---ASVKDLFSNRASRNGM 301
             ..||      :.:|..||..|.|         :...:.:.:..||   .|||..:.:..| .|.
plant   293 AVQGKGQLQEYKEKAMLALSKLRG---------RPPGDKISEKLVDDAYLSVKTAYEDEKS-GGN 347

  Fly   302 VISVL-------------LMVFQQFSGINAVIFFMNEIFES---SSTLNPNVCTIVVGVVQVIMT 350
            .:.|.             |::|||.:|..:|:::...|.::   |:..:....::::||.:::||
plant   348 FLEVFQGPNLKALTIGGGLVLFQQITGQPSVLYYAGSILQTAGFSAAADATRVSVIIGVFKLLMT 412

  Fly   351 LASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCI---VLFIVSFS 412
            ..:...::..||:.|||...:.:.:.|.:|.||         .:.:|..||:.:   :|::..:.
plant   413 WVAVAKVDDLGRRPLLIGGVSGIALSLFLLSAY---------YKFLGGFPLVAVGALLLYVGCYQ 468

  Fly   413 VGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNAG-GADVPFWFFSAWMGVA 476
            :.:|||.|:|:.|:|....:|..:||:|:.|:...::||:.|..|... ||:..|..|.....|:
plant   469 ISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEFLGAENLFLLFGGIALVS 533

  Fly   477 TAYVAIALQETKGKSASQIQS 497
            ..:|.:.:.||||.|..:|:|
plant   534 LLFVILVVPETKGLSLEEIES 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 106/422 (25%)
MFS_1 96..443 CDD:284993 95/382 (25%)
AT5G59250NP_200733.2 MFS_GLUT10_12_Class3_like 104..552 CDD:340920 117/466 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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