DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and SFP1

DIOPT Version :10

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_568493.1 Gene:SFP1 / 832794 AraportID:AT5G27350 Length:474 Species:Arabidopsis thaliana


Alignment Length:492 Identity:153/492 - (31%)
Similarity:249/492 - (50%) Gaps:49/492 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EDGDSRNPITYDLLQ-ENQSKTSKTRQYVAAMII-------CLGAVAAGTALSWTSPVFPQISAG 76
            |:|.|   |...||| :|::..|:.|  :.|.:|       | |:.:.|.|..:||        |
plant     4 EEGRS---IEEGLLQLKNKNDDSECR--ITACVILSTFVAVC-GSFSFGVATGYTS--------G 54

  Fly    77 NESSFNSTTGGISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDI 141
            .|             |....|:.|:.:|.:..||....||..|||..|.:|..||||.|..|.|.
plant    55 AE-------------TGVMKDLDLSIAQFSAFGSFATLGAAIGALFCGNLAMVIGRRGTMWVSDF 106

  Fly   142 PFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGIL 206
            ..|..|::::||..|..|..||.:.||..|....|.|:||:||....:||:.....|||...|:.
plant   107 LCITGWLSIAFAKEVVLLNFGRIISGIGFGLTSYVVPVYIAEITPKHVRGTFTFSNQLLQNAGLA 171

  Fly   207 FIYVVGALVSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWG---DYCNT 268
            .||..|..::|:||:||..:...:.::|||.|||:|.:|.|.|...|...:|..|.|   |....
plant   172 MIYFCGNFITWRTLALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLFRLRGRDADISRE 236

  Fly   269 SNAIQA----IQNDLDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFES 329
            ::.||.    ::||     ..:|..||| .|..|..:|:.:.||:.|||||..|||.:.:.||..
plant   237 ASEIQVMTKMVEND-----SKSSFSDLF-QRKYRYTLVVGIGLMLIQQFSGSAAVISYASTIFRK 295

  Fly   330 SSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQ 394
            :. .:..:.|.::|:..:...:...:|::|.||:.||:.|:..|::...:||...|:.:...||:
plant   296 AG-FSVAIGTTMLGIFVIPKAMIGLILVDKWGRRPLLMTSAFGMSMTCMLLGVAFTLQKMQLLSE 359

  Fly   395 SIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNA 459
            ....|..:|::::|.::::|.|.:||::|.|:|..::|..|.|:..::::...|:||:.|..|..
plant   360 LTPILSFICVMMYIATYAIGLGGLPWVIMSEIFPINIKVTAGSIVTLVSFSSSSIVTYAFNFLFE 424

  Fly   460 GGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQ 496
            ......|:.|:...|.|..::.:.:.||||.|..:||
plant   425 WSTQGTFFIFAGIGGAALLFIWLLVPETKGLSLEEIQ 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS_GLUT6_8_Class3_like 46..494 CDD:340916 141/461 (31%)
SFP1NP_568493.1 MFS_GLUT6_8_Class3_like 32..459 CDD:340916 140/455 (31%)

Return to query results.
Submit another query.