DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and MSS1

DIOPT Version :10

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:453 Identity:134/453 - (29%)
Similarity:215/453 - (47%) Gaps:69/453 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VFPQISAGNESSFNSTTGGISNSTSNEND-IRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGR 132
            |:.::.||.:..        ||....:|. ::|..|...|.|....|.|       .|....:||
plant    61 VYRKVVAGADKD--------SNYCKYDNQGLQLFTSSLYLAGLTATFFA-------SYTTRTLGR 110

  Fly   133 RYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLF 197
            |.|.::..:.||:.....:.|..:..|..||.|:|...|......|:::||||.|.|||.|..||
plant   111 RLTMLIAGVFFIIGVALNAGAQDLAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILF 175

  Fly   198 QLLLTIGILFIYVVG---ALV----SWKTLSLLCLIIPILLL-VGLFIVPETPVYLLKNGKRSEA 254
            ||.:||||||..:|.   |.:    .|: |||....||.||| ||..:|.|||..|::.|:..|.
plant   176 QLNVTIGILFANLVNYGTAKIKGGWGWR-LSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEG 239

  Fly   255 NRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLFSN---RASRNGMVISVLLMVFQQFSGI 316
            ...|:.:.|    |.|......:.|:.:.:...||..|.|   |.:|..:||:|.|.:|||.:||
plant   240 KAVLRRIRG----TDNVEPEFADLLEASRLAKEVKHPFRNLLQRRNRPQLVIAVALQIFQQCTGI 300

  Fly   317 NAVIFFMNEIFE-----SSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLI-------FS 369
            ||::|:...:|.     |.::|   ...:|.|.|.|:.||.|...::|.||::||:       ||
plant   301 NAIMFYAPVLFSTLGFGSDASL---YSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFS 362

  Fly   370 STIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGI 434
            ..::.:.|.:    ...:..|:||:....|.::.|..::.:|:..:||:.|::..|.|..:.:..
plant   363 QVVIAIILGV----KVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSA 423

  Fly   435 AVSLSVMMNWVCVSLVT---------WLFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETK 488
            ..|::|.:|.:...::.         :.||:         |.|||||:.:.:.:|...|.|||
plant   424 GQSVTVCVNLLFTFIIAQAFLSMLCHFKFGI---------FIFFSAWVLIMSVFVMFLLPETK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS_GLUT6_8_Class3_like 46..494 CDD:340916 134/453 (30%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 131/449 (29%)

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