DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and MSS1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:453 Identity:134/453 - (29%)
Similarity:215/453 - (47%) Gaps:69/453 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VFPQISAGNESSFNSTTGGISNSTSNEND-IRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGR 132
            |:.::.||.:..        ||....:|. ::|..|...|.|....|.|       .|....:||
plant    61 VYRKVVAGADKD--------SNYCKYDNQGLQLFTSSLYLAGLTATFFA-------SYTTRTLGR 110

  Fly   133 RYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLF 197
            |.|.::..:.||:.....:.|..:..|..||.|:|...|......|:::||||.|.|||.|..||
plant   111 RLTMLIAGVFFIIGVALNAGAQDLAMLIAGRILLGCGVGFANQAVPLFLSEIAPTRIRGGLNILF 175

  Fly   198 QLLLTIGILFIYVVG---ALV----SWKTLSLLCLIIPILLL-VGLFIVPETPVYLLKNGKRSEA 254
            ||.:||||||..:|.   |.:    .|: |||....||.||| ||..:|.|||..|::.|:..|.
plant   176 QLNVTIGILFANLVNYGTAKIKGGWGWR-LSLGLAGIPALLLTVGALLVTETPNSLVERGRLDEG 239

  Fly   255 NRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLFSN---RASRNGMVISVLLMVFQQFSGI 316
            ...|:.:.|    |.|......:.|:.:.:...||..|.|   |.:|..:||:|.|.:|||.:||
plant   240 KAVLRRIRG----TDNVEPEFADLLEASRLAKEVKHPFRNLLQRRNRPQLVIAVALQIFQQCTGI 300

  Fly   317 NAVIFFMNEIFE-----SSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLI-------FS 369
            ||::|:...:|.     |.::|   ...:|.|.|.|:.||.|...::|.||::||:       ||
plant   301 NAIMFYAPVLFSTLGFGSDASL---YSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFS 362

  Fly   370 STIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGI 434
            ..::.:.|.:    ...:..|:||:....|.::.|..::.:|:..:||:.|::..|.|..:.:..
plant   363 QVVIAIILGV----KVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSA 423

  Fly   435 AVSLSVMMNWVCVSLVT---------WLFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETK 488
            ..|::|.:|.:...::.         :.||:         |.|||||:.:.:.:|...|.|||
plant   424 GQSVTVCVNLLFTFIIAQAFLSMLCHFKFGI---------FIFFSAWVLIMSVFVMFLLPETK 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 125/418 (30%)
MFS_1 96..443 CDD:284993 115/370 (31%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 131/449 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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