DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and PMT6

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_195385.1 Gene:PMT6 / 829820 AraportID:AT4G36670 Length:493 Species:Arabidopsis thaliana


Alignment Length:459 Identity:131/459 - (28%)
Similarity:216/459 - (47%) Gaps:54/459 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FNSTTGGISNS-TSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFI 144
            |...||.:|.: ...|.|::..|.|..::..:|...||.|:|.:|..:|.||||||.::..|.|:
plant    31 FGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVLASILFM 95

  Fly   145 LAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIY 209
            |..|.:.:..:...|..||...|:..|...:|||:|.:|||..|.||.|.:|..|.::||||..|
plant    96 LGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASLPHLCISIGILLGY 160

  Fly   210 VVGAL-------VSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCN 267
            :|...       :.|:.:..:..:..::|..|:..:||:|.:|:..|:..|....|:.:      
plant   161 IVNYFFSKLPMHIGWRLMLGIAAVPSLVLAFGILKMPESPRWLIMQGRLKEGKEILELV------ 219

  Fly   268 TSNAIQ----AIQNDLDQTGVDASVKD--------------------LFSNRASRNGMVISVLLM 308
             ||:.:    ..|:.....|:|....|                    |....|.|..::.::.:.
plant   220 -SNSPEEAELRFQDIKAAAGIDPKCVDDVVKMEGKKTHGEGVWKELILRPTPAVRRVLLTALGIH 283

  Fly   309 VFQQFSGINAVIFFMNEIFESSSTLNPN---VCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSS 370
            .||..|||.||:.:...||:.:.....:   :.||.||:::......::||::|.||:.||:.|.
plant   284 FFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSV 348

  Fly   371 TIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVL---FIVSFSVGYGPIPWMMMGELFMPDVK 432
            ..|.:.|.|||...|:.::.  ...:.|..:|.||.   |:..||:|.|||.|:...|:|...::
plant   349 GGMVIALTMLGFGLTMAQNA--GGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLR 411

  Fly   433 GIAVSLSVMMNWVCVSLVTWLF----GVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSAS 493
            ....||.|.:|.|..:.|:..|    ..:..|||   |:.|:....||..:....|.||||||..
plant   412 AQGASLGVAVNRVMNATVSMSFLSLTSAITTGGA---FFMFAGVAAVAWNFFFFLLPETKGKSLE 473

  Fly   494 QIQS 497
            :|::
plant   474 EIEA 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 118/426 (28%)
MFS_1 96..443 CDD:284993 107/383 (28%)
PMT6NP_195385.1 Sugar_tr 20..479 CDD:278511 131/459 (29%)
MFS 22..463 CDD:119392 123/443 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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