DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and TMT2

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001190923.1 Gene:TMT2 / 829684 AraportID:AT4G35300 Length:739 Species:Arabidopsis thaliana


Alignment Length:744 Identity:132/744 - (17%)
Similarity:231/744 - (31%) Gaps:312/744 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AMIICLGAVAAGTALSWTSPVFPQISAGNESSFNSTTGGISNSTSNENDIRLTDSQKTLVGSMLP 113
            |:::.:.|........|.               |:|..|.......|.::....|.:.|:.:|..
plant     4 AVLVAIAAAVGNLLQGWD---------------NATIAGAVLYIKKEFNLESNPSVEGLIVAMSL 53

  Fly   114 FGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAP 178
            .||......||.:||.:|||...::..|.:.:..:.:.::.:|..|.|||.|.|...|....:.|
plant    54 IGATLITTCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVP 118

  Fly   179 MYISEIAETSIRGSLGTLFQLLLTIGILFIY--VVGALV----SWKTLSLLCLIIP--ILLLVGL 235
            :||||.|...|||.|.||.|...:.|:...|  |.|..:    ||: |.|..|.||  :...:.:
plant   119 IYISETAPPEIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSWR-LMLGVLFIPSLVFFFLTV 182

  Fly   236 FIVPETPVYLLKNGKRSEANRALKWLWG------------------------------------- 263
            |.:||:|.:|:..|:..||.|.|:.|.|                                     
plant   183 FFLPESPRWLVSKGRMLEAKRVLQRLRGREDVSGEMALLVEGLGIGGETTIEEYIIGPADEVTDD 247

  Fly   264 ----------------------------------------------------------------- 263
                                                                             
plant   248 HDIAVDKDQIKLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPLVTLFGSVHEKMP 312

  Fly   264 ---------------------------------------DYCN--------------TSNAIQAI 275
                                                   ||.:              .|....::
plant   313 DTGSMRSALFPHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSDHGDDSEDDLHSPLISRQTTSM 377

  Fly   276 QNDL------------------------------------------------------------- 279
            :.|:                                                             
plant   378 EKDMPHTAHGTLSTFRHGSQVQGAQGEGAGSMGIGGGWQVAWKWTEREDESGQKEGGFKRIYLHQ 442

  Fly   280 -----------------DQTG----VDASV---------KDLFSNR------------------- 295
                             |.||    |.||.         |||....                   
plant   443 EGFPGSRRGSIVSLPGGDGTGEADFVQASALVSQPALYSKDLLKEHTIGPAMVHPSETTKGSIWH 507

  Fly   296 -----ASRNGMVISVLLMVFQQFSGINAVIFFMNEIFE--------SSSTLNPNVCTIVVGVVQV 347
                 ..:..:|:.|.|.:.|||||||.|:::..:|.|        |:..::.:..::::..:..
plant   508 DLHDPGVKRALVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTT 572

  Fly   348 IMTL----ASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFI 408
            .:.|    .:..|::.:||:.||:.:..|:...|.:|...|.::.:: :..::  |..:.:||:.
plant   573 FVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVLVISNLVHMNS-IVHAV--LSTVSVVLYF 634

  Fly   409 VSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVL--NAGGADVPFWFFSA 471
            ..|.:|:||.|.::..|:|...|:||.:::..:..|:|..:||:...||  :.|.|.| |..::.
plant   635 CFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGV-FGMYAI 698

  Fly   472 WMGVATAYVAIALQETKGKSASQIQSWLS 500
            ...::..:|.|.:.||||.....|..:.|
plant   699 VCCISWVFVFIKVPETKGMPLEVITEFFS 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 118/677 (17%)
MFS_1 96..443 CDD:284993 107/636 (17%)
TMT2NP_001190923.1 MFS 14..>174 CDD:421695 49/175 (28%)
MFS <516..713 CDD:421695 49/200 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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