DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and STP12

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_193879.4 Gene:STP12 / 828233 AraportID:AT4G21480 Length:502 Species:Arabidopsis thaliana


Alignment Length:492 Identity:122/492 - (24%)
Similarity:228/492 - (46%) Gaps:65/492 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VAAMIICLGAVAAG----------TALSWTSPVFPQISAGNESSFNSTTGGISNSTSNENDIRLT 101
            |..::..:|.:..|          |..|:....||.:....:...:      ||.....:.:.| 
plant    25 VTCIVAAMGGLIFGYDIGISGGVTTMDSFQQKFFPSVYEKQKKDHD------SNQYCRFDSVSL- 82

  Fly   102 DSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLI 166
                ||..|.|...||..:|.:.|:..:.||:.:.::..:.|....:...||.:|..|.:||.|:
plant    83 ----TLFTSSLYLAALCSSLVASYVTRQFGRKISMLLGGVLFCAGALLNGFATAVWMLIVGRLLL 143

  Fly   167 GIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVG---ALVSWK-TLSLLCLII 227
            |...|......|:|:||:|....||:|...|||.:|||||...|:.   :.:||. .|||...::
plant   144 GFGIGFTNQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNFFFSKISWGWRLSLGGAVV 208

  Fly   228 PILLL-VGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDL 291
            |.|:: ||..|:|:||..:::.|:...|...|:.:.|        :..|.::::...:.:....|
plant   209 PALIITVGSLILPDTPNSMIERGQFRLAEAKLRKIRG--------VDDIDDEINDLIIASEASKL 265

  Fly   292 FSN-------RASRNGMVISVLLMVFQQFSGINAVIFFMNEIFE-----SSSTLNPNVCTIVVGV 344
            ..:       |..|..:.:::|:..|||.:|||.::|:...:|:     |.:.|   :..:|.|:
plant   266 VEHPWRNLLQRKYRPHLTMAILIPAFQQLTGINVIMFYAPVLFQTIGFGSDAAL---ISAVVTGL 327

  Fly   345 VQVIMTLASSLLIEKAGRKILLI---FSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLP------ 400
            |.|..|:.|...::|.||:.|.:   |...|..|.:|.     .|.....:..:.|.||      
plant   328 VNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAA-----AIGAKFGVDGTPGVLPKWYAIV 387

  Fly   401 -LLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNAGGADV 464
             :|.|.:::.:|:..:||:.|::..|:|..:::..|.|::|.:|.:...|:..:|.::.......
plant   388 VVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFG 452

  Fly   465 PFWFFSAWMGVATAYVAIALQETKGKSASQI-QSWLS 500
            .|.||:.::.|.:.:|.:.|.||:|....:: :.|.|
plant   453 LFIFFAFFVVVMSIFVYLFLPETRGVPIEEMNRVWRS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 107/412 (26%)
MFS_1 96..443 CDD:284993 99/373 (27%)
STP12NP_193879.4 MFS_STP 29..474 CDD:340919 116/471 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

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