DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and TMT3

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001190054.1 Gene:TMT3 / 824312 AraportID:AT3G51490 Length:737 Species:Arabidopsis thaliana


Alignment Length:740 Identity:125/740 - (16%)
Similarity:226/740 - (30%) Gaps:308/740 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AAMIICLGAVAAGTALSWTSPVFPQISAGNESSFNSTTGGISNSTSNENDIRLTDSQKTLVGSML 112
            :.:::.|.|........|.               |:|..|.......|..:......:.|:.:|.
plant     3 SVVLVALAAAIGNMLQGWD---------------NATIAGAVIYIKKEFHLEKEPKIEGLIVAMS 52

  Fly   113 PFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVA 177
            ..||......||.::|::|||...::..:.:.|:.|.:.::.:|..|...|.|.|...|....:.
plant    53 LIGATLITTFSGPVSDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARLLDGFGIGLAVTLV 117

  Fly   178 PMYISEIAETSIRGSLGTLFQLLLTIGILFIY--VVGALV----SWKTLSLLCLIIPIL--LLVG 234
            |:||||.|.:.|||.|.|..|...:.|:...|  |.|..:    ||: |.|..|.||.:  .::.
plant   118 PIYISETAPSEIRGLLNTFPQFCGSGGMFLSYCLVFGMSLQESPSWR-LMLGVLSIPSIAYFVLA 181

  Fly   235 LFIVPETPVYLLKNGKRSEANRALKWLWG------------------------------------ 263
            .|.:||:|.:|:..|:..||.:.|:.|.|                                    
plant   182 AFFLPESPRWLVSKGRMDEARQVLQRLRGREDVSGELALLVEGLGVGKDTSIEEYVIGPDNEENE 246

  Fly   264 ----------------------------------------------------------------- 263
                                                                             
plant   247 GGNELPRKDQIKLYGPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHENLP 311

  Fly   264 -DYCNTSNAIQAIQN---------------DLDQTGVDASVKD---------------------- 290
             :..|.|:......|               |.::...|:|.:|                      
plant   312 SENMNASSRSMLFPNMGSILGMMGRQESQWDPERNNEDSSDQDENLNSPLLSPQTTEPDDYHQRT 376

  Fly   291 ----------------------------------------------------------------- 290
                                                                             
plant   377 VGTMHRRQSSLFMANVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANNNTN 441

  Fly   291 --LFSNRAS-------------------------------------------------------- 297
              .||.|.|                                                        
plant   442 NIPFSRRGSLLSFHPEGDGHDQVNGYVQAAALVSQASMMPGGKGETAMLPKEVKDGPGWRELKEP 506

  Fly   298 --RNGMVISVLLMVFQQFSGINAVIFFMNEIFESS--STLNPNV------CTIVVGVVQVIM--- 349
              :..:::.|.|.:.|||:|||.|:::..:|.|.:  |:|..|:      .::::..:..::   
plant   507 GVKRALMVGVGLQILQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLP 571

  Fly   350 -TLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWL-PLLCIVLFIVSFS 412
             .|.|..|::..||:.|::.:..|:.:.|..|...:.:|    |..||..| ....:.:::..|.
plant   572 CILVSMRLMDVTGRRSLMLSTIPILILSLVTLVIGSLVN----LGGSINALISTASVTVYLSCFV 632

  Fly   413 VGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVL--NAGGADVPFWFFSAWMGV 475
            :|:|.||.::..|:|...|:|:.:::..:..|:|..:||:...|:  :.|.|.| |..::....|
plant   633 MGFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGV-FGIYAIVCAV 696

  Fly   476 ATAYVAIALQETKGKSASQIQSWLS 500
            |..:|.:.:.||||.....|..:.|
plant   697 AWVFVYLKVPETKGMPLEVISEFFS 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 112/672 (17%)
MFS_1 96..443 CDD:284993 100/631 (16%)
TMT3NP_001190054.1 MFS 9..>186 CDD:119392 49/192 (26%)
MFS <512..703 CDD:119392 49/195 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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