DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and AT3G19940

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_188628.1 Gene:AT3G19940 / 821532 AraportID:AT3G19940 Length:514 Species:Arabidopsis thaliana


Alignment Length:507 Identity:118/507 - (23%)
Similarity:225/507 - (44%) Gaps:80/507 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RQY---VAAMII--CLGAVAAGTALSW--------------TSPVFPQISAGNESSFNSTTGGIS 89
            |.|   |.|.:|  |:.|...|....:              .:..|||:.:..:.:.:.|.    
plant    15 RSYEGGVTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTA---- 75

  Fly    90 NSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFAN 154
                   ..:..:....|..|.|...||..:..:..|..:.||:.:..:..:.|::..:..:||.
plant    76 -------YCKFDNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAV 133

  Fly   155 SVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVG------A 213
            :|..|.:||.|:|:..|......|:|:||:|...|||:|...||:.:|||||...::.      |
plant   134 NVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMA 198

  Fly   214 LVSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQND 278
            ...|:....|..:..:::::|.||:|:||..:|:.||..||.:.||.:.|    ..|.....|:.
plant   199 QHGWRVSLGLAAVPAVVMVIGSFILPDTPNSMLERGKNEEAKQMLKKIRG----ADNVDHEFQDL 259

  Fly   279 LDQTGVDASVKDLFSN---RASRNGMVISVLLMVFQQFSGINAVIFFMNEIFES-----SSTLNP 335
            :|.......|::.:.|   ...|..::....:..|||.:|||.::|:...:|::     .:.|  
plant   260 IDAVEAAKKVENPWKNIMESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAAL-- 322

  Fly   336 NVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGA-----YNTINRHTDLSQS 395
             :..::.|||.::.|..|...:::.||::|.:.....|.:|..::|:     :.|....|....:
plant   323 -MSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPAT 386

  Fly   396 IGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVK--GIAVSLSVMM-------NWVCVSLVT 451
            ..|: |..|.:::..|:..:||:.|::..|:...:::  |.|:::||.|       .:....|..
plant   387 ADWI-LAFICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCH 450

  Fly   452 WLFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQI-----QSW 498
            ..||:         |:||::.:.:.|.::...|.||||....::     |.|
plant   451 MKFGL---------FYFFASMVAIMTVFIYFLLPETKGVPIEEMGRVWKQHW 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 99/413 (24%)
MFS_1 96..443 CDD:284993 92/374 (25%)
AT3G19940NP_188628.1 Sugar_tr 29..489 CDD:278511 111/487 (23%)
MFS 79..475 CDD:119392 99/412 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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