DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and PMT5

DIOPT Version :10

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_188513.1 Gene:PMT5 / 821416 AraportID:AT3G18830 Length:539 Species:Arabidopsis thaliana


Alignment Length:446 Identity:114/446 - (25%)
Similarity:212/446 - (47%) Gaps:49/446 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 ENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWL 159
            :.|:::.|.|..::...|...:|.|:..:|..:|.||||||.::....|....|.:..:.:..:|
plant    65 KRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFL 129

  Fly   160 YLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYV-------VGALVSW 217
            ..|||:.||..|...::||:|.:|::..|.||.|.:..::.:..||:..||       :...|.|
plant   130 MFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLPLKVGW 194

  Fly   218 KTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTS--NAIQAIQNDLD 280
            :.:..:..:..::|.:|:..:||:|.:|:..|:..:|.|.|     |..:.|  .|...:::...
plant   195 RLMLGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVL-----DKTSDSPTEATLRLEDIKH 254

  Fly   281 QTGVDASVKDLFSNRASRNG--------------------MVISVLLMVFQQFSGINAVIFFMNE 325
            ..|:.|...|.....:.||.                    |:.::.:..|||.|||:||:.|...
plant   255 AAGIPADCHDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPR 319

  Fly   326 IFESSSTLNPN---VCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTIN 387
            ||:::.....:   :.|:.||||:....|.::.|:::.||:.||:.|...|.:.||.||...||.
plant   320 IFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTII 384

  Fly   388 RHTDLSQSIGW---LPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSL 449
            ..::  :.:.|   :.:..::.::.:||:|.|||.|:...|:|...::....|:.|::|.|...:
plant   385 DQSE--KKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGV 447

  Fly   450 VTWLF----GVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQSWLSG 501
            ::..|    ..:..|||   |:.|.....||..:....|.||:|:....:....||
plant   448 ISISFLPMSKAMTTGGA---FYLFGGIATVAWVFFYTFLPETQGRMLEDMDELFSG 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS_GLUT6_8_Class3_like 46..494 CDD:340916 112/437 (26%)
PMT5NP_188513.1 MFS_PLT 42..494 CDD:340995 112/438 (26%)

Return to query results.
Submit another query.