DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and VGT1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_186959.2 Gene:VGT1 / 821117 AraportID:AT3G03090 Length:503 Species:Arabidopsis thaliana


Alignment Length:512 Identity:134/512 - (26%)
Similarity:253/512 - (49%) Gaps:53/512 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TVSQEDGDSRN-PITYD---LLQENQSKTSKTRQYVAA----MIICLGAVAAGTALSWTSPVFPQ 72
            :|.|..|||.: .||.:   ||:||.|  .:....:||    :...|||:..|..:..||.....
plant    12 SVGQVVGDSSSGGITAEKEPLLKENHS--PENYSVLAAIPPFLFPALGALLFGYEIGATSCAIMS 74

  Fly    73 ISAGNESSFNSTTGGISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAM 137
            :.       :.|..|||....:..|:.:..|     ||:  :|||.|::.:..:||.||||...:
plant    75 LK-------SPTLSGISWYDLSSVDVGIITS-----GSL--YGALIGSIVAFSVADIIGRRKELI 125

  Fly   138 VMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLT 202
            :....:::..|....|.....|.:||...|:..|.....|||||:|.|.:.|||.:.:|.:....
plant   126 LAAFLYLVGAIVTVVAPVFSILIIGRVTYGMGIGLTMHAAPMYIAETAPSQIRGRMISLKEFSTV 190

  Fly   203 IGILFIYVVGAL-----VSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEAN------- 255
            :|::..|.:|:|     ..|:.:....|..|:::..|:..:|.:|.:||....:.:.|       
plant   191 LGMVGGYGIGSLWITVISGWRYMYATILPFPVIMGTGMCWLPASPRWLLLRALQGQGNGENLQQA 255

  Fly   256 --RALKWLWGDYCNTSNA--IQAIQNDLDQTGVD--ASVKDLFSNRASRNGMVISVLLMVFQQFS 314
              |:|..|.|.....|.|  :..|..:|...|.|  |:..:||..:..: .:.|:..|::|||.:
plant   256 AIRSLCRLRGSVIADSAAEQVNEILAELSLVGEDKEATFGELFRGKCLK-ALTIAGGLVLFQQIT 319

  Fly   315 GINAVIFFMNEIFES---SSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVC 376
            |..:|:::...|.::   |:..:....:|::|:::::||..|.::|::.||:.||:...:.|.:.
plant   320 GQPSVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVIS 384

  Fly   377 LAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVM 441
            |.:||:|....:      ::..:.:..::|::..:.:.:|||.|:|:.|:|...::|..:||:|:
plant   385 LFLLGSYYMFYK------NVPAVAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVL 443

  Fly   442 MNWVCVSLVTWLFGVL-NAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQS 497
            :|:...:|||:.|..| ...||.:.|..|.....|:..::...:.||||.:..:|::
plant   444 VNFGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIYYIVPETKGLTLEEIEA 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 105/407 (26%)
MFS_1 96..443 CDD:284993 94/367 (26%)
VGT1NP_186959.2 MFS_GLUT10_12_Class3_like 53..498 CDD:340920 119/465 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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