DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1208 and STP6

DIOPT Version :9

Sequence 1:	NP_001097692.1	Gene:	CG1208 / 40727	FlyBaseID:	FBgn0037386	Length:	502	Species:	Drosophila melanogaster
Sequence 2:	NP_187247.1	Gene:	STP6 / 819766	AraportID:	AT3G05960	Length:	507	Species:	Arabidopsis thaliana

Alignment Length:	482	Identity:	125/482 - (25%)
Similarity:	221/482 - (45%)	Gaps:	69/482 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    46 YVAAMIICLGAVAAGTALSWTSPVFPQISAGNESSFNSTTGGIS----------------NSTSN 94
            ::..||..:|.:..|..:                   ..:||:|                ....:
plant    22 FICVMIAAVGGLIFGYDI-------------------GISGGVSAMDDFLKEFFPAVWERKKHVH 67

  Fly    95 ENDIRLTDSQ-KTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFIL-AWITLSFANSVG 157
            ||:....|:| ..|..|.|...||..:..:.....::|||.|.....|.|:: ..:|....|.|
plant    68 ENNYCKYDNQFLQLFTSSLYLAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLTAGAVNLV- 131

  Fly   158 WLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVS------ 216
            .|.:||..:|...|......|:::||||...:||.|..:|||::|||||...:|....:
plant   132 MLIIGRLFLGFGVGFGNQAVPLFLSEIAPAQLRGGLNIVFQLMVTIGILIANIVNYFTATVHPYG 196

  Fly   217 WKTLSLLCLIIP-ILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWG-DYCNTSNAIQAIQNDL 279
            |: ::|....|| ::||.|..::.|||..|::..|..|...||:.:.| |..|  :..::|.:..
plant   197 WR-IALGGAGIPAVILLFGSLLIIETPTSLIERNKNEEGKEALRKIRGVDDIN--DEYESIVHAC 258

  Fly   280 DQTGVDASVKDLFS---NRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFE-----SSSTLNPN 336
            |   :.:.|||.:.   ..|||...:|.:||.:||||:||||::|:...:|:     |.:.|
plant   259 D---IASQVKDPYRKLLKPASRPPFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSDAAL--- 317

  Fly   337 VCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPL 401
            :..::.|.:.|:.|.....|:::.||:.||:.||..|.:|..::|.  .:.:...::.::|....
plant   318 LSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIGI--ILAKDLGVTGTLGRPQA 380

  Fly   402 LCIVLFIVSFSVGY----GPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNAGGA 462
            |.:|:|:..:.:|:    ||:.|::..|.|..:.:....:::|..|.....::...|..:..|..
plant   381 LVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSMLCGMR 445

  Fly   463 DVPFWFFSAWMGVATAYVAIALQETKG 489
            ...|:|||.|:.|...:....:.||||
plant   446 SGIFFFFSGWIIVMGLFAFFFIPETKG 472

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1208	NP_001097692.1	MFS	96..482	CDD:119392	113/407 (28%)
CG1208	NP_001097692.1	MFS_1	96..443	CDD:284993	104/368 (28%)
STP6	NP_187247.1	MFS_STP	27..469	CDD:340919	120/472 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0254
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D430696at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820