DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1208 and AT3G05400

DIOPT Version :9

Sequence 1:	NP_001097692.1	Gene:	CG1208 / 40727	FlyBaseID:	FBgn0037386	Length:	502	Species:	Drosophila melanogaster
Sequence 2:	NP_187191.2	Gene:	AT3G05400 / 819704	AraportID:	AT3G05400	Length:	462	Species:	Arabidopsis thaliana

Alignment Length:	490	Identity:	125/490 - (25%)
Similarity:	225/490 - (45%)	Gaps:	70/490 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 LLQENQSKTSKTRQYV-AAMIICLGAVAAGTALSWTSPVFPQISAGNESSFNSTTGGISNSTSNE 95
            ||.:.:...:.|...: :..||...:...|.|:.:|:.....|.
plant    12 LLAKKEDSANTTPLLIFSTFIIVSASFTFGAAIGYTADTMSSIM--------------------- 55

  Fly    96 NDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLY 160
            :|:.|:.:|.:|.||:..||.:.||:.|...|...|.:.|..|.|:..|..|:.:|.|..:.||.
plant    56 SDLDLSLAQFSLFGSLSTFGGMIGAIFSAKAASAFGHKMTLWVADLFCITGWLAISLAKDIIWLD 120

  Fly   161 LGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVSWKTLSLLCL 225
            :||||:||..|....|.|:||:||....:||:.....|||...|:..:|..|..:||:||:::..
plant   121 MGRFLVGIGVGLISYVVPVYIAEITPKHVRGAFTFSNQLLQNCGVAVVYYFGNFLSWRTLAIIGS 185

  Fly   226 IIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWG-------DYCNTSNAIQAIQNDLDQTG 283
            |...:.::|||.:||:|.:|.|.|:..|....|:.|.|       :.|....:::|     .:..
plant   186 IPCWIQVIGLFFIPESPRWLAKKGRDKECEEVLQKLRGRKYDIVPEACEIKISVEA-----SKKN 245

  Fly   284 VDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVVQVI 348
            .:.:::.||..|.:.. :.|.:.||:.||..|...:..:.:.:|:.:. ....:..:|:.::.|.
plant   246 SNINIRSLFEKRYAHQ-LTIGIGLMLLQQLCGTAGISSYGSTLFKLAG-FPARIGMMVLSLIVVP 308

  Fly   349 MTLASSLLIEKAGRKILLIFSST-IMTVCLAMLGAYNTINRHTDLSQSIGWL-PLLC---IVLFI 408
            .:|...:|:::.||:.||:.|:. :...|:.:..|:..    .|: ..||.: |:.|   |:.|.
plant   309 KSLMGLILVDRWGRRPLLMTSALGLCLSCITLAVAFGV----KDV-PGIGKITPIFCFIGILSFT 368

  Fly   409 VSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNAGGADVPFWFFSAW- 472
            :.|::|.|.:||::|.|:|..|:|.:|.||..:.||    ...|:        |:..|.|...|
plant   369 MMFAIGMGALPWIIMSEIFPMDIKVLAGSLVTIANW----FTGWI--------ANYAFNFMLVWS 421

  Fly   473 -----------MGVATAYVAIALQETKGKSASQIQ 496
                       .|....:....:.||:..:..:||
plant   422 PSGTFIISAIICGATIVFTWCLVPETRRLTLEEIQ 456

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1208	NP_001097692.1	MFS	96..482	CDD:119392	112/409 (27%)
CG1208	NP_001097692.1	MFS_1	96..443	CDD:284993	104/358 (29%)
AT3G05400	NP_187191.2	Sugar_tr	30..459	CDD:278511	122/472 (26%)
AT3G05400	NP_187191.2	MFS	30..444	CDD:119392	118/458 (26%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0254
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D430696at2759
OrthoFinder	1	1.000	-	-		FOG0000275
OrthoInspector	1	1.000	-	-		otm2619
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48021
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.920