DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and INT1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_850393.1 Gene:INT1 / 818934 AraportID:AT2G43330 Length:509 Species:Arabidopsis thaliana


Alignment Length:447 Identity:112/447 - (25%)
Similarity:214/447 - (47%) Gaps:41/447 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FNSTTGGISNSTSN-ENDIRLTDS----QKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMD 140
            |...||.||.:... ::|..:...    |:|:| ||...||:.||...|:|.|..||:...:..|
plant    45 FGYDTGVISGALLYIKDDFEVVKQSSFLQETIV-SMALVGAMIGAAAGGWINDYYGRKKATLFAD 108

  Fly   141 IPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGI 205
            :.|....|.::.|.....|..||.|:|:..|...|.||:||:|.:.:.:||.|.:...|::|.|.
plant   109 VVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPSEVRGGLVSTNVLMITGGQ 173

  Fly   206 LFIYVVGALV-----SWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDY 265
            ...|:|.:..     :|:.:..:..:..::..:.:..:||:|.:|....:::||.:.|...:.  
plant   174 FLSYLVNSAFTQVPGTWRWMLGVSGVPAVIQFILMLFMPESPRWLFMKNRKAEAIQVLARTYD-- 236

  Fly   266 CNTSNAIQAIQNDLDQ-TGVDASVK---------DLFSNRASRNGMVISVLLMVFQQFSGINAVI 320
                  |..:::::|. :..:...|         |:|.::..|...:....|..||||:|||.|:
plant   237 ------ISRLEDEIDHLSAAEEEEKQRKRTVGYLDVFRSKELRLAFLAGAGLQAFQQFTGINTVM 295

  Fly   321 FFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLL----IEKAGRKILLIFSSTIMTVCLAMLG 381
            ::...|.:.:. .:.|...:.:.::...|..|.:::    |:..|||.|.:  |::..|.:::|.
plant   296 YYSPTIVQMAG-FHSNQLALFLSLIVAAMNAAGTVVGIYFIDHCGRKKLAL--SSLFGVIISLLI 357

  Fly   382 AYNTINRHTDLSQS---IGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMN 443
            ...:..:.::.|..   .|||.:|.:.|:||.|:.|.||:||.:..|::....:||...:|..:|
plant   358 LSVSFFKQSETSSDGGLYGWLAVLGLALYIVFFAPGMGPVPWTVNSEIYPQQYRGICGGMSATVN 422

  Fly   444 WVCVSLVTWLF-GVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQI-QSW 498
            |:...:|...| .:..|.|..:.|...:....:|..:|.:.:.||:|.:.|:: |.|
plant   423 WISNLIVAQTFLTIAEAAGTGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEVEQIW 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 101/412 (25%)
MFS_1 96..443 CDD:284993 92/372 (25%)
INT1NP_850393.1 Sugar_tr 34..479 CDD:278511 111/445 (25%)
MFS 35..464 CDD:119392 106/430 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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