DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and AT2G18480

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_179438.1 Gene:AT2G18480 / 816363 AraportID:AT2G18480 Length:508 Species:Arabidopsis thaliana


Alignment Length:470 Identity:115/470 - (24%)
Similarity:219/470 - (46%) Gaps:69/470 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FNSTTGGISNS-TSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFI 144
            |...||.:|.: ....:|:::.|:|..::..:|...||.|:|.:|..:|.||||||..:..:.|:
plant    36 FGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFL 100

  Fly   145 LAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIY 209
            :..:.:.:..:...|.:||.:.|:..|...::||:|.:||:..|.||.|.:|.:|.:::|||..|
plant   101 VGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGY 165

  Fly   210 V----VGAL---VSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCN 267
            |    .|.|   :.|:.:..:.....::|..|:..:||:|.:|:..|:..||.:.:..:    .|
plant   166 VSNYCFGKLTLKLGWRLMLGIAAFPSLILAFGITRMPESPRWLVMQGRLEEAKKIMVLV----SN 226

  Fly   268 T-SNAIQAIQNDLDQTGVDAS-VKDLFSNRASRNG-------------------MVISVLLMVFQ 311
            | ..|.:..::.|....||.: :|::......:|.                   ::.:|.:..|:
plant   227 TEEEAEERFRDILTAAEVDVTEIKEVGGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFE 291

  Fly   312 QFSGINAVIFFMNEIFESSSTLNPN---VCTIVVGVVQVIMTLASSLLIEKAGRKILL------- 366
            ..:||.||:.:...||:.:..::.:   :.|:.||:.:....:.::.|::|.||:.||       
plant   292 HATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGM 356

  Fly   367 IFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIV---LFIVSFSVGYGPIPWMMMGELFM 428
            :|:.|.:.|.|.|:..:.          .:.|...|.||   .|:..||:|.|||.|:...|:|.
plant   357 VFALTSLAVSLTMVQRFG----------RLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFP 411

  Fly   429 PDVKGIAVSLSVMMNWVCVSLVTWLF----GVLNAGGADVPFWFFSAWMGVATA---YVAIALQE 486
            ..::....|:.|.:|.:..:.|:..|    ..:..||.      |..:.|:|.|   :....|.|
plant   412 LRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGV------FFVFAGIAVAAWWFFFFMLPE 470

  Fly   487 TKGKSASQIQSWLSG 501
            |||....:::....|
plant   471 TKGLPLEEMEKLFGG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 105/433 (24%)
MFS_1 96..443 CDD:284993 96/387 (25%)
AT2G18480NP_179438.1 MFS_PLT 36..479 CDD:340995 114/462 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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