DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and PMT2

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_179210.1 Gene:PMT2 / 816110 AraportID:AT2G16130 Length:511 Species:Arabidopsis thaliana


Alignment Length:488 Identity:128/488 - (26%)
Similarity:230/488 - (47%) Gaps:86/488 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GNESSFNSTTGGISNSTS----------------NENDIRLTDSQKTLVGSMLPFGALFGALPSG 124
            ||.|.|......:::.||                .::|::|:|.|..::..:|...:|.|:..:|
plant    20 GNRSRFAFACAILASMTSIILGYDIGVMSGAAIFIKDDLKLSDVQLEILMGILNIYSLIGSGAAG 84

  Fly   125 YIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSI 189
            ..:|.||||||.::....|....:.:.||.:..::.:|||:.||..|...::||:|.:|:|..|.
plant    85 RTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASS 149

  Fly   190 RGSLGTLFQLLLTIGILFIYVVGAL-------VSWKTLSLLCLIIPILLLVGLFIVPETPVYLLK 247
            ||.|.:..::.:.||||..||....       :.|:.:..:..:..:.|.:|:..:||:|.:|:.
plant   150 RGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIGWRFMLGIGAVPSVFLAIGVLAMPESPRWLVM 214

  Fly   248 NGKRSEANRALKWLWGDYCNTSN----AIQAIQNDLDQ-TGVDASVKD---LFSNRAS------- 297
            .|:..:|.:.|.       .|||    ||..: ||:.: .|:...:.|   :..|:.|       
plant   215 QGRLGDAFKVLD-------KTSNTKEEAISRL-NDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWK 271

  Fly   298 ----------RNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLNPN---VCTIVVGVVQVIM 349
                      |:.::..:.:...||.|||:||:.:...||..:...:.|   :.|:.||||:.:.
plant   272 DLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLF 336

  Fly   350 TLASSLLIEKAGRKILLIFSSTIMTVCLAMLG-AYNTINRHTDLSQSIGW---LPLLCIVLFIVS 410
            .:..:.|:::.||:.||:.|...|...|..|| :...|:|:.  .|::.|   |.:..::.|:.:
plant   337 IVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNP--GQTLKWAIGLAVTTVMTFVAT 399

  Fly   411 FSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGV--------LNAGGADVPFW 467
            ||:|.||:.|:...|:|...::....||.||:|    .|::.:.|:        |..|||     
plant   400 FSLGAGPVTWVYASEIFPVRLRAQGASLGVMLN----RLMSGIIGMTFLSLSKGLTIGGA----- 455

  Fly   468 FFSAWMGVATA---YVAIALQETKGKSASQIQS 497
             |..:.|||.|   :....|.||:|....:|:|
plant   456 -FLLFAGVAVAAWVFFFTFLPETRGVPLEEIES 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 116/435 (27%)
MFS_1 96..443 CDD:284993 104/385 (27%)
PMT2NP_179210.1 Sugar_tr 29..489 CDD:278511 124/479 (26%)
MFS 31..473 CDD:119392 118/461 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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