DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and PMT1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:503 Identity:125/503 - (24%)
Similarity:234/503 - (46%) Gaps:83/503 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VAAGTALSWTSPVFPQISAGNESSFNSTTGGISNSTS----------------NENDIRLTDSQK 105
            |..|..::.:.|  |:   ||.|.:......:::.||                .::|::|:|.|.
plant     6 VEQGVVIAESEP--PR---GNRSRYAFACAILASMTSIILGYDIGVMSGASIFIKDDLKLSDVQL 65

  Fly   106 TLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGIAT 170
            .::..:|...:|.|:..:|..:|.:|||||.::....|....:.:.||.:..::.:|||:.||..
plant    66 EILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGV 130

  Fly   171 GSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVS-------WKTLSLLCLIIP 228
            |...::||:|.:|:|..|.||.|.:..::.:.||||..||.....|       |:.:..:..:..
plant   131 GYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPS 195

  Fly   229 ILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQ----TGVDASVK 289
            :.|.:|:..:||:|.:|:..|:..:|.:.|.       .|||..:...:.||.    .|:...:.
plant   196 VFLAIGVLAMPESPRWLVLQGRLGDAFKVLD-------KTSNTKEEAISRLDDIKRAVGIPDDMT 253

  Fly   290 D---LFSNRAS-----------------RNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLN 334
            |   :..|:.|                 |:.::..:.:...||.|||:||:.:...||..:...:
plant   254 DDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKS 318

  Fly   335 PN---VCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLG-AYNTINRHTDLSQS 395
            .|   :.|:.||||:.:..:..:.::::.||:.||:.|...|.:.|..|| :...|||:.  .|:
plant   319 KNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNP--GQT 381

  Fly   396 IGW---LPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGV- 456
            :.|   |.:..::.|:.:||:|.||:.|:...|:|...::....||.||:|    .|::.:.|: 
plant   382 LKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLN----RLMSGIIGMT 442

  Fly   457 -------LNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQS 497
                   |..|||   |..|:.....|..:....|.||:|....::::
plant   443 FLSLSKGLTIGGA---FLLFAGVAAAAWVFFFTFLPETRGIPLEEMET 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 112/431 (26%)
MFS_1 96..443 CDD:284993 102/384 (27%)
PMT1NP_179209.1 Sugar_tr 29..489 CDD:278511 118/475 (25%)
MFS 31..473 CDD:119392 114/457 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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