DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and slc2a13b

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_005163236.1 Gene:slc2a13b / 559440 ZFINID:ZDB-GENE-090812-1 Length:641 Species:Danio rerio


Alignment Length:520 Identity:116/520 - (22%)
Similarity:209/520 - (40%) Gaps:102/520 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FNSTTGGISNS-TSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFI 144
            |...||.:|.: ...:.:.:|:...:.|:.|:....|...||..|::..|.|||...::....|.
Zfish    49 FGYDTGVVSGAMLLLKREKKLSSVWQELLVSITVGAAAVSALAGGFLNGRFGRRVCILLASFIFC 113

  Fly   145 LAWITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIY 209
            ...|.||.|.:...|..||..:|:..|...:..|:||:|::...:||.|.|:..|.:|.|.....
Zfish   114 AGGIILSVARNKEALLCGRLTVGLGLGIASMTVPVYIAEVSPPDLRGQLVTVNTLFITGGQFIAS 178

  Fly   210 VVGALVS------WKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNT 268
            ||....|      |:.:..|.::...|..:|...:||:|.:||:.|....|...|:.:.|| .:.
Zfish   179 VVDGAFSYLPHDGWRFMLGLSVVPAALQFLGFLFLPESPRWLLQKGFTQNALLVLRQIRGD-VDV 242

  Fly   269 SNAIQAIQNDLDQTGVDAS----VKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFES 329
            ....::|:..:.:...|.:    :..:.::..:|..:::...|.:|||.:|||.|:::...|.:.
Zfish   243 EEEFESIRCSIQEEQRDVAGGPVLWRMLASPPARRALIVGCGLQMFQQLAGINTVMYYSATILQM 307

  Fly   330 SSTLNPNVCT-IVVGV--VQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGA--------- 382
            |...:..:.. :..|.  ...:.||....|:|:.||:.|.:.|.....|.|.:|.|         
Zfish   308 SGVQDDQMAIWLAAGTAFTNFLFTLVGVWLVERVGRRRLTMASLLGTAVSLMVLAAGFLLSAQAS 372

  Fly   383 ------------YNT----------------------IN-------------------------- 387
                        :|:                      :|                          
Zfish   373 PPVTFHPSNPSIHNSTCGNYGFCESCMLDPDCGFCYGLNATAVVQSSCVPVDPANTETAALGRCF 437

  Fly   388 RHTDLSQSI-----------GWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVM 441
            ..|..:.|:           .|:.||.::|::..|:.|.||:||.:..|::....:....:.|..
Zfish   438 NGTQKASSVFWAYNYCPTPYSWVVLLGLILYLAFFAPGMGPMPWTVNSEIYPLWARSTGNACSAG 502

  Fly   442 MNWVCVSLVTWLF----GVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQSWLSGR 502
            :||:|..||:..|    ..|...||   |:.::|...:...:|:..|.||||....:|:|..|.|
Zfish   503 VNWICNVLVSLTFLHVAQYLTYYGA---FFLYAALALLGFVFVSGCLPETKGLRLEEIESLFSRR 564

  Fly   503  502
            Zfish   565  564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 103/482 (21%)
MFS_1 96..443 CDD:284993 91/439 (21%)
slc2a13bXP_005163236.1 Sugar_tr 38..561 CDD:278511 114/515 (22%)
MFS 40..542 CDD:119392 106/496 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X729
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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