DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and CG17929

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_650532.2 Gene:CG17929 / 41978 FlyBaseID:FBgn0038415 Length:491 Species:Drosophila melanogaster


Alignment Length:495 Identity:93/495 - (18%)
Similarity:173/495 - (34%) Gaps:152/495 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALP---------------------SGYIADRIG 131
            |::||||...:|..:.|..:..::. |..::|.:.                     |.:|....|
  Fly    35 INSSTSNPGSVRQINKQINVACAVF-FLYVYGGMDFAHSAGWNQTLNTTATQVFKCSWFIGVLAG 98

  Fly   132 RRYTAMVM----DIPFILAWITLSFANSV---------GWLYLGRFLIGIATGSFCVVAPMYISE 183
            ....::.|    .:||.:....:....|:         |.|...|::.|...|...|...::.:|
  Fly    99 AALASLTMTFLPKLPFYVLGGLMQLTGSIIFTCKPFDYGCLLAARYVAGAGIGLITVPFLIHSAE 163

  Fly   184 IAETSIRGSLGTLFQ--LLLTIGILFIY-----------------VVGALVSWKTLSLLCLIIPI 229
            :|..:.||..|::.|  |.|.|.|..||                 ::|.:.|...|.:..|.|  
  Fly   164 VATDNHRGVSGSMEQCGLALGIAIQVIYDTQWVDDKEASVNEVHGIIGIVFSIIGLGMTALSI-- 226

  Fly   230 LLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLD--QTGVDASVKDLF 292
                      |:|:|.|:..::.:|.:....|.|.:.:      ::..:.:  |..|..|.|..|
  Fly   227 ----------ESPIYYLRIKQKEKARKCHAKLLGSFNH------SVDQEFEEIQLYVAESQKRTF 275

  Fly   293 SNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNV-C--TIVVGVVQVIMTLASS 354
            .... |..:|..:.|::::.|...:..:.....:.:|:......: |  ..|.|:|:::..|.:.
  Fly   276 CQEL-RISVVPFIKLLLYRGFVAFSFSLPLSESLIKSALLTEGFISCWPVTVWGLVRLLGALVAQ 339

  Fly   355 LLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIV-------------- 405
            ..::|.|||    |.|.:..:|:|:|                    :||:.              
  Fly   340 GFLDKLGRK----FVSLVGLLCMAIL--------------------MLCMAASYANPANALMTYY 380

  Fly   406 ----------------LFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWV--CVSLVTW 452
                            ||:.|.||        .:||.|...||...|...:.....  .:::|.:
  Fly   381 MYQVWRLGLAFQAFAGLFVCSSSV--------YLGEAFPIKVKPFFVGYIIGFEQTIHIINIVGY 437

  Fly   453 LFGVLNAGGADVPFWFFSAWMG----VATAYVAIALQETK 488
            ..|..|.      |:.:...:|    |...:..|.:.|||
  Fly   438 NKGYENF------FYHYYLSVGIILLVGVVFFGIVIPETK 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 84/479 (18%)
MFS_1 96..443 CDD:284993 78/434 (18%)
CG17929NP_650532.2 Sugar_tr 67..482 CDD:278511 84/462 (18%)
MFS 295..>425 CDD:119392 29/161 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444611
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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