DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and slc2a12

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_956832.1 Gene:slc2a12 / 393510 ZFINID:ZDB-GENE-040426-1513 Length:610 Species:Danio rerio


Alignment Length:592 Identity:130/592 - (21%)
Similarity:240/592 - (40%) Gaps:150/592 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RNPITYDLLQENQSKTSKTRQYVAAMIICLGAVAAGTALSWTSPVFPQISAGNESSFNSTTGGIS 89
            :||.|:..|:::.|..|...:   |:::|..:||..:.|          ..|.|.|.      ||
Zfish    21 QNPDTHIHLEQSPSAKSGNGR---ALVLCSVSVACLSGL----------LMGYEMSL------IS 66

  Fly    90 NSTSNENDIRLTDS---QKTLVGSMLPFGALFGALPSGYIADRIGRRY----TAMVMDIPFILAW 147
            .:.....|: ||.|   |:.:|||:| .||...:|..|.|.|..|||:    ||::..:..:|:.
Zfish    67 GALLQLRDV-LTLSCPEQEQVVGSLL-LGAFLLSLGGGTILDHYGRRFTIILTALLCVLGTLLSV 129

  Fly   148 ITLSFANSVGW-LYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVV 211
            ..:||     | |.:||.|:|::.......:.:|.:|:|..:.||....:::|::.:|:|    :
Zfish   130 CVVSF-----WALVVGRMLVGMSVALSGTASCLYAAEVAPAAWRGRCVCVYELMVVLGML----L 185

  Fly   212 GALVSWK--------TLSLLCLIIPILLLVGLF-IVPETPVYLLKNGKRSEANRALKWLWGDYCN 267
            |..:||.        ..:....::|.||..|:. ::|::|.:||...:..||:..|..|....  
Zfish   186 GFGLSWAFAGVPDGWRFTFGGALLPALLQAGVMPLLPDSPRFLLAQQREKEAHATLLRLRAGI-- 248

  Fly   268 TSNAIQAIQNDLDQTGVDASVK------DLFSNRASR-NGMVISVLLMVFQQFSGINAVIFFMNE 325
              ..::.::::|....:....:      |||.:|.:. ..:::...|:..||.:|...::.:.:.
Zfish   249 --KEVEPVEDELRAIRLAMGAERLHGFLDLFQSRDNMLQRLLVGAALVFLQQATGQPNILAYAST 311

  Fly   326 IFESSSTLNPNVCTIV---VGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAY---- 383
            :..|.........|:.   .|||:|..|:.:..|::|.|.|.||.....:|.:..|.|||.    
Zfish   312 VLSSVGFHGNEAATLASTGFGVVKVGGTIPAIFLVDKVGPKALLCVGVVVMMLSTATLGAITMQS 376

  Fly   384 ------------NTIN---------------------------------------------RHT- 390
                        ||.|                                             .|| 
Zfish   377 RTHVSSLCRGPGNTANFTLFETGDETDIQTNTPLGLYQPQNKLKTNAFLTSINDTREHWILNHTY 441

  Fly   391 --------------------------DLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMP 429
                                      ::|.|:.|:.|:.:::::..||:..||:..:::..:|..
Zfish   442 DHRTALIETAELSKKDSAKIALQSLHEVSPSLKWISLVSLLVYVAGFSISLGPMVHVVLSAIFPT 506

  Fly   430 DVKGIAVSLSVMMNWVCVSLVTWLFGVLNAG-GADVPFWFFSAWMGVATAYVAIALQETKGKSAS 493
            .::|.|||:....||....|::..|..|... |.....:.:||...:...:|.:.:.||||:|..
Zfish   507 GIRGKAVSVISAFNWATNLLISMTFLTLTERIGLPTVIFSYSAMSFLLVVFVIVFVPETKGRSLE 571

  Fly   494 QIQSWLS 500
            ||...|:
Zfish   572 QISKELA 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 106/501 (21%)
MFS_1 96..443 CDD:284993 97/461 (21%)
slc2a12NP_956832.1 MFS 48..395 CDD:119392 90/377 (24%)
SP 49..573 CDD:273317 119/554 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577373
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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